RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 LOC107986453A0A1B0GWG9 222 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 FAM223BA6NKX1 122 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 KRTAP29-1A8MX34 341 aaPredicted RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 FAM90A23PA8MXZ1 464 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 H3BMQ9 156 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 H3BN98 237 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 AIPO00170 330 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 SLC16A6O15403 523 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 MPPED1O15442 326 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 TGOLN2O43493 480 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 GATCO43716 136 aaKnown RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 RBBP9O75884 186 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 OR7C1O76099 320 aaPredicted RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 HBZP02008 142 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 SAA2P0DJI9 122 aaPredicted RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 TMBIM6P55061 237 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 CXCR4P61073 352 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 VBP1P61758 197 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 ADARB1P78563 741 aaKnown RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 IL13RA2Q14627 380 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 TMEM30BQ3MIR4 351 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 PIGYQ3MUY2 71 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 ZNF585BQ52M93 769 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 SLC35D3Q5M8T2 416 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 LPCAT4Q643R3 524 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 OR4A47Q6IF82 309 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 ZNF322Q6U7Q0 402 aaPredicted RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 ASCL4Q6XD76 172 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 GLDNQ6ZMI3 551 aaPredicted RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 ZNF833PQ6ZTB9 187 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 C5orf24Q7Z6I8 188 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 AMIGO2Q86SJ2 522 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 GPHB5Q86YW7 130 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 SERPINA12Q8IW75 414 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 FAM223AQ8IWN6 122 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 ODF3L1Q8IXM7 274 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 AQP11Q8NBQ7 271 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 SETD9Q8NE22 299 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 CCDC54Q8NEL0 328 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 ZNF680Q8NEM1 530 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 OR1L1Q8NH94 360 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 FAM46BQ96A09 425 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 FGGYQ96C11 551 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 ADAT3Q96EY9 351 aaPredicted RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 TSNAXQ99598 290 aaKnown RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 PHB2Q99623 299 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 KCTD14Q9BQ13 255 aaPredicted RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 NICN1Q9BSH3 213 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 ALG8Q9BVK2 526 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 RCC2Q9P258 522 aaKnown RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 TAGLN3Q9UI15 199 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 TRAPPC2LQ9UL33 140 aa3.8□□□□□ -1.8
HERC1-213ENST00000561359 SAMD4AQ9UPU9 718 aaKnown RBP3.8□□□□□ -1.8
HERC1-213ENST00000561359 NBDYA0A0U1RRE5 68 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 OR4C46A6NHA9 309 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 OR5H14A6NHG9 310 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 F5H697 171 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 TNFRSF11BO00300 401 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 TSPAN4O14817 238 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 NOL3O60936 208 aaKnown RBP3.79□□□□□ -1.8
HERC1-213ENST00000561359 CCNB2O95067 398 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 PRH1P02810 166 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 FABP3P05413 133 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 KRT8P05787 483 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 OR9G9P0C7N8 305 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 TRAPPC2P0DI81 140 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 TRAPPC2BP0DI82 140 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 NPY1RP25929 384 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 EPHA2P29317 976 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 MC5RP33032 325 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 PPP1CCP36873 323 aaKnown RBP3.79□□□□□ -1.8
HERC1-213ENST00000561359 PJVKQ0ZLH3 352 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 ALKBH1Q13686 389 aaKnown RBP3.79□□□□□ -1.8
HERC1-213ENST00000561359 GNMTQ14749 295 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 C15orf32Q32M92 178 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 C12orf74Q32Q52 190 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 MORN2Q502X0 79 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 FAM209BQ5JX69 171 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 SLC25A30Q5SVS4 291 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 ATAD3CQ5T2N8 411 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 SYT6Q5T7P8 510 aaPredicted RBP3.79□□□□□ -1.8
HERC1-213ENST00000561359 PXDC1Q5TGL8 231 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 LAMTOR1Q6IAA8 161 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 UTS2BQ765I0 119 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 STX19Q8N4C7 294 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 OR10K1Q8NGX5 313 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 MARC2Q969Z3 335 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 CNBD2Q96M20 576 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 RNF5Q99942 180 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 BCL7BQ9BQE9 202 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 YTHDF1Q9BYJ9 559 aaKnown RBP3.79□□□□□ -1.8
HERC1-213ENST00000561359 C5orf66Q9H5L9 145 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 ZNF581Q9P0T4 197 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 CELA1Q9UNI1 258 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 EXOSC1Q9Y3B2 195 aaKnown RBP3.79□□□□□ -1.8
HERC1-213ENST00000561359 WASHC3Q9Y3C0 194 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 TMED3Q9Y3Q3 217 aa3.79□□□□□ -1.8
HERC1-213ENST00000561359 LINC00862A6NCI5 91 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 ZNF98A6NK75 572 aa3.78□□□□□ -1.8
HERC1-213ENST00000561359 A8MWP6 167 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms