RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 SNRPGP15A8MWD9 76 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 RAB3DO95716 219 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 LY6G6CO95867 125 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 CD74P04233 296 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 GSTP1P09211 210 aaKnown RBP7.56□□□□□ -1.2
TPM1-225ENST00000560679 IGHV3-43DP0DP04 118 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 MEF2DQ14814 521 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 CDNFQ49AH0 187 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 LINC00322Q6ZN03 302 aaPredicted RBP7.56□□□□□ -1.2
TPM1-225ENST00000560679 ZNF439Q8NDP4 499 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 OR10R2Q8NGX6 335 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 RITA1Q96K30 269 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 SEC22CQ9BRL7 303 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 GINS4Q9BRT9 223 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 RSRP1Q9BUV0 290 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 TMEM59Q9BXS4 323 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 LPAR5Q9H1C0 372 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 GFOD1Q9NXC2 390 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 ING4Q9UNL4 249 aa7.56□□□□□ -1.2
TPM1-225ENST00000560679 A0A0A6YYD4 124 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 DISC1C4P0D8 188 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 SMLR1H3BR10 107 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 SDCBPO00560 298 aaPredicted RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 CREBL2O60519 120 aaPredicted RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 IGHV3-11P01762 117 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 HIST1H1DP16402 221 aaKnown RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 ANXA7P20073 488 aaKnown RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 TBPP20226 339 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 IL3RAP26951 378 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 CRIP2P52943 208 aaPredicted RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 RPS27AP62979 156 aaKnown RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 KISS1Q15726 138 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 ECSCRQ19T08 205 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 PIGYQ3MUY2 71 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 SLC25A48Q6ZT89 311 aaKnown RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 RPP25LQ8N5L8 163 aaKnown RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 BEST4Q8NFU0 473 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 OR56B1Q8NGI3 324 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 OR4D10Q8NGI6 311 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 OR51S1Q8NGJ8 323 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 OR52M1Q8NGK5 317 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 TNFAIP8L1Q8WVP5 186 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 CPNE2Q96FN4 548 aaPredicted RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 HYLS1Q96M11 299 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 URM1Q9BTM9 101 aaKnown RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 CST11Q9H112 138 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 SLA2Q9H6Q3 261 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 ANAPC10Q9UM13 185 aa7.55□□□□□ -1.2
TPM1-225ENST00000560679 DYNC1H1Q14204 4646 aaKnown RBP7.55□□□□□ -1.2
TPM1-225ENST00000560679 A0A1W2PN81 502 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 UBE2QL1A1L167 161 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 M0QYG6 137 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 FABP7O15540 132 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 TXNL1O43396 289 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 SSX5O60225 188 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 CRTAPO75718 401 aaPredicted RBP7.54□□□□□ -1.2
TPM1-225ENST00000560679 BRI3O95415 125 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 HSPB1P04792 205 aaKnown RBP7.54□□□□□ -1.2
TPM1-225ENST00000560679 RLN1P04808 185 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 ZNF735P0CB33 412 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 CXCL3P19876 107 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 CHRNA7P36544 502 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 ZNF134P52741 427 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 GNG2P59768 71 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 IL13RA2Q14627 380 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 C5orf64Q2M2E5 130 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 RNASE10Q5GAN6 216 aaKnown RBP7.54□□□□□ -1.2
TPM1-225ENST00000560679 ELP2Q6IA86 826 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 IL34Q6ZMJ4 242 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 CCDC107Q8WV48 283 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 NUDCD2Q8WVJ2 157 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 RAB3CQ96E17 227 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 FAM210AQ96ND0 272 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 SLC25A21Q9BQT8 299 aaPredicted RBP7.54□□□□□ -1.2
TPM1-225ENST00000560679 NICN1Q9BSH3 213 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 DPCDQ9BVM2 203 aaPredicted RBP7.54□□□□□ -1.2
TPM1-225ENST00000560679 SELENOIQ9C0D9 397 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 ZNF436Q9C0F3 470 aaPredicted RBP7.54□□□□□ -1.2
TPM1-225ENST00000560679 TINAGL1Q9GZM7 467 aaPredicted RBP7.54□□□□□ -1.2
TPM1-225ENST00000560679 TUBA4BQ9H853 241 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 IFT46Q9NQC8 304 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 SLC2A8Q9NY64 477 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 MGAT4CQ9UBM8 478 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 SCP2D1Q9UJQ7 156 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 ELF5Q9UKW6 265 aaPredicted RBP7.54□□□□□ -1.2
TPM1-225ENST00000560679 FOXA2Q9Y261 457 aaPredicted RBP7.54□□□□□ -1.2
TPM1-225ENST00000560679 BOLA1Q9Y3E2 137 aa7.54□□□□□ -1.2
TPM1-225ENST00000560679 IZUMO1RA6ND01 250 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 FOXI3A8MTJ6 420 aaPredicted RBP7.53□□□□□ -1.2
TPM1-225ENST00000560679 MFNGO00587 321 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 SLC25A17O43808 307 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 RGS11O94810 467 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 FCER2P06734 321 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 GIPP09681 153 aaPredicted RBP7.53□□□□□ -1.2
TPM1-225ENST00000560679 TMEM225BP0DP42 221 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 EGR2P11161 476 aaPredicted RBP7.53□□□□□ -1.2
TPM1-225ENST00000560679 MGMTP16455 207 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 GNB3P16520 340 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 NAT1P18440 290 aa7.53□□□□□ -1.2
TPM1-225ENST00000560679 CBX5P45973 191 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms