RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 RBPMSQ93062 196 aaKnown RBP9.5□□□□□ -0.89
LDLR-212ENST00000560467 MALSU1Q96EH3 234 aa9.5□□□□□ -0.89
LDLR-212ENST00000560467 SLC35D1Q9NTN3 355 aa9.5□□□□□ -0.89
LDLR-212ENST00000560467 ZFP57Q9NU63 452 aa9.5□□□□□ -0.89
LDLR-212ENST00000560467 COMMD9Q9P000 198 aa9.5□□□□□ -0.89
LDLR-212ENST00000560467 A0A1B0GVG6 124 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 GOSR2O14653 212 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 TIMM23O14925 209 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 NPFFO15130 113 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 CDS2O95674 445 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 IGLV2-14P01704 120 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 MMP9P14780 707 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 VDAC1P21796 283 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 UCP1P25874 307 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 REG1BP48304 166 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 ZNF137PP52743 207 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 SUPT4H1P63272 117 aaKnown RBP9.49□□□□□ -0.89
LDLR-212ENST00000560467 TMEM187Q14656 261 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 OR2B11Q5JQS5 317 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 TPTE2P1Q5T6R2 138 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 FAM219AQ8IW50 185 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 PDZD9Q8IXQ8 264 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 CADM3Q8N126 398 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 TMEM86BQ8N661 226 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 LRTM2Q8N967 370 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 FLYWCH2Q96CP2 140 aaKnown RBP9.49□□□□□ -0.89
LDLR-212ENST00000560467 TMEM56Q96MV1 263 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 TP53RKQ96S44 253 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 PLEKHA2Q9HB19 425 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 WASHC3Q9Y3C0 194 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 RNF114Q9Y508 228 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 TMEM56-RWDD3S4R434 201 aa9.49□□□□□ -0.89
LDLR-212ENST00000560467 A0A0B4J293 547 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 IGHV1-69DA0A0B4J2H0 117 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 A0A1W2PRD5 423 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 A0A1W2PRF3 423 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 A0A1W2PRM7 423 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 RNASEK-C17orf49H0YIS7 233 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 GPR137BO60478 399 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 RBMXL2O75526 392 aaKnown RBP9.48□□□□□ -0.89
LDLR-212ENST00000560467 IGHV1-69P01742 117 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 HOXB5P09067 269 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 FAM106CPP0CH98 169 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 ZNF816Q0VGE8 651 aaPredicted RBP9.48□□□□□ -0.89
LDLR-212ENST00000560467 ANKRD55Q3KP44 614 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 KIAA2026Q5HYC2 2103 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 H2BFWTQ7Z2G1 175 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 PDPNQ86YL7 162 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 ODF3L1Q8IXM7 274 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 DMBX1Q8NFW5 382 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 OR4P4Q8NGL7 312 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 OR4C13Q8NGP0 309 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 GLYATL2Q8WU03 294 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 SSMEM1Q8WWF3 244 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 TBX15Q96SF7 602 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 HILPDAQ9Y5L2 63 aa9.48□□□□□ -0.89
LDLR-212ENST00000560467 CENPVL3A0A0U1RRI6 287 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 ODF3BA8MYP8 253 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 SHOXO15266 292 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 SNAPC5O75971 98 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 CRYZL1O95825 349 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 KRASP01116 189 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 RLN2P04090 185 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 PET100P0DJ07 73 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 SULT1A3P0DMM9 295 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 SULT1A4P0DMN0 295 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 CT45A6P0DMU7 189 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 CT45A5P0DMU8 189 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 CT45A7P0DMV0 189 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 NQO2P16083 231 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 LGALS7P47929 136 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 PROK1P58294 105 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 RPS16P62249 146 aaKnown RBP9.47□□□□□ -0.89
LDLR-212ENST00000560467 PRB3Q04118 309 aaPredicted RBP9.47□□□□□ -0.89
LDLR-212ENST00000560467 FGL1Q08830 312 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 KLRD1Q13241 179 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 FCN2Q15485 313 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 SSX2Q16385 188 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 SELENOHQ8IZQ5 122 aaKnown RBP9.47□□□□□ -0.89
LDLR-212ENST00000560467 LINC01006Q8NI28 216 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 VSTM2AQ8TAG5 236 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 OSR1Q8TAX0 266 aaPredicted RBP9.47□□□□□ -0.89
LDLR-212ENST00000560467 FAM110DQ8TAY7 271 aaPredicted RBP9.47□□□□□ -0.89
LDLR-212ENST00000560467 CHAC2Q8WUX2 184 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 ST6GALNAC6Q969X2 333 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 GPHA2Q96T91 129 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 TSNAXQ99598 290 aaKnown RBP9.47□□□□□ -0.89
LDLR-212ENST00000560467 RNF5Q99942 180 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 MRPL20Q9BYC9 149 aaKnown RBP9.47□□□□□ -0.89
LDLR-212ENST00000560467 ZNF436Q9C0F3 470 aaPredicted RBP9.47□□□□□ -0.89
LDLR-212ENST00000560467 GSKIPQ9P0R6 139 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 POMT1Q9Y6A1 747 aa9.47□□□□□ -0.89
LDLR-212ENST00000560467 IGHV1-3A0A0C4DH29 117 aa9.46□□□□□ -0.9
LDLR-212ENST00000560467 A0A0U1RQK1 487 aa9.46□□□□□ -0.9
LDLR-212ENST00000560467 A0A1B0GU03 582 aa9.46□□□□□ -0.9
LDLR-212ENST00000560467 LINC00473A8K010 186 aa9.46□□□□□ -0.9
LDLR-212ENST00000560467 HLA-GP17693 338 aa9.46□□□□□ -0.9
LDLR-212ENST00000560467 SAA4P35542 130 aa9.46□□□□□ -0.9
LDLR-212ENST00000560467 RAP2BP61225 183 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms