RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 CHEK1O14757 476 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 FABP3P05413 133 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 T-ENOLP0DO92 83 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 PSKH1P11801 424 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 HSD17B1P14061 328 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 HIST1H1CP16403 213 aaKnown RBP4.39□□□□□ -1.71
HERC1-208ENST00000560462 RRM2P31350 389 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 HNRNPA3P51991 378 aaKnown RBP4.39□□□□□ -1.71
HERC1-208ENST00000560462 GAGE5Q13069 117 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 GAGE6Q13070 117 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 EXOSC2Q13868 293 aaKnown RBP4.39□□□□□ -1.71
HERC1-208ENST00000560462 OPCMLQ14982 345 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 ATAD3CQ5T2N8 411 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 PXDC1Q5TGL8 231 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 CLEC19AQ6UXS0 136 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 ZNF562Q6V9R5 426 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 ASRGL1Q7L266 308 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 SSX7Q7RTT5 188 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 LINC00311Q8N616 119 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 TCEANCQ8N8B7 351 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 OR10A7Q8NGE5 316 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 OR4K13Q8NH42 304 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 GRPEL2Q8TAA5 225 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 COQ2Q96H96 371 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 PYURFQ96I23 114 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 NMNAT3Q96T66 252 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 PKIBQ9C010 78 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 CHST5Q9GZS9 411 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 PBOV1Q9GZY1 135 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 C5orf66Q9H5L9 145 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 TMEM231Q9H6L2 316 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 LINC00574Q9H8X3 128 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 GORASP2Q9H8Y8 452 aa4.39□□□□□ -1.71
HERC1-208ENST00000560462 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 PPP5D1E7EU14 171 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 DYNC1I1O14576 645 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 ARPC3O15145 178 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 MRPS14O60783 128 aaKnown RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 GGCTO75223 188 aaKnown RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 NRASP01111 189 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 CSN2P05814 226 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 DUTP33316 252 aaKnown RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 LGALS7P47929 136 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 GSSP48637 474 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 SMIM11AP58511 58 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 RELQ04864 619 aaPredicted RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 TSPAN31Q12999 210 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 ATXN7L3Q14CW9 347 aaPredicted RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 ZNF146Q15072 292 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 ZNF585BQ52M93 769 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 TMEM41BQ5BJD5 291 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 SAMD4BQ5PRF9 694 aaKnown RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 TMEM69Q5SWH9 247 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 SLC25A48Q6ZT89 311 aaKnown RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 GPHB5Q86YW7 130 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 C8orf31Q8N9H6 132 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 OR9Q2Q8NGE9 314 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 MARC2Q969Z3 335 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 MCUR1Q96AQ8 359 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 CLCC1Q96S66 551 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 URM1Q9BTM9 101 aaKnown RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 NDUFA13Q9P0J0 144 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 MRPS7Q9Y2R9 242 aaKnown RBP4.38□□□□□ -1.71
HERC1-208ENST00000560462 CDH10Q9Y6N8 788 aa4.38□□□□□ -1.71
HERC1-208ENST00000560462 A0A0U1RRA0 63 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 DHRS12A0PJE2 317 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 TVP23AA6NH52 213 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 PANO1I0J062 215 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 SH2D1BO14796 132 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 SYT7O43581 403 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 IDH3BO43837 385 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 OR2H2O95918 312 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 NUDT3O95989 172 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 CALCBP10092 127 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 ATP6V1B2P21281 511 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 PYCR1P32322 319 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 SSTR5P35346 364 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 IFNGR2P38484 337 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 ZNF137PP52743 207 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 RPL24P83731 157 aaKnown RBP4.37□□□□□ -1.71
HERC1-208ENST00000560462 RIPPLY1Q0D2K3 151 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 FHL2Q14192 279 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 PTGES3Q15185 160 aaKnown RBP4.37□□□□□ -1.71
HERC1-208ENST00000560462 FAM106AQ4KMX7 169 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 SPIN3Q5JUX0 258 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 LAMTOR1Q6IAA8 161 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 RPL13AP3Q6NVV1 102 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 Q6ZSA8 131 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 COX8CQ7Z4L0 72 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 Q8IYB0 196 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 DEFB107AQ8IZN7 70 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 PROKR2Q8NFJ6 384 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 OR52M1Q8NGK5 317 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 OR8D4Q8NGM9 314 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 GNPDA2Q8TDQ7 276 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 EXOSC4Q9NPD3 245 aaKnown RBP4.37□□□□□ -1.71
HERC1-208ENST00000560462 IL1RAPQ9NPH3 570 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 TMEM14BQ9NUH8 114 aa4.37□□□□□ -1.71
HERC1-208ENST00000560462 COA4Q9NYJ1 87 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms