RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 LY6LH3BQJ8 138 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 NPFFO15130 113 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 SHOXO15266 292 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 RBMXL2O75526 392 aaKnown RBP5.21□□□□□ -1.58
SPG11-221ENST00000560299 ADAP1O75689 374 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 SIX6O95475 246 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 CRYZL1O95825 349 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 KRASP01116 189 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 IGHV1-69P01742 117 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 HNRNPCP07910 306 aaKnown RBP eCLIP5.21□□□□□ -1.58
SPG11-221ENST00000560299 IGHV4-31P0DP07 118 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 CXCL3P19876 107 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 CD1BP29016 333 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 LGALS7P47929 136 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 REG1BP48304 166 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 RPS16P62249 146 aaKnown RBP5.21□□□□□ -1.58
SPG11-221ENST00000560299 SRSF4Q08170 494 aaKnown RBP5.21□□□□□ -1.58
SPG11-221ENST00000560299 KLRD1Q13241 179 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 SSX2Q16385 188 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 ZFP69Q49AA0 526 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 ZNF585BQ52M93 769 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 UTF1Q5T230 341 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 HCP5Q6MZN7 132 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 LYZL2Q7Z4W2 148 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 PDZD9Q8IXQ8 264 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 TCTE3Q8IZS6 198 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 ZNF383Q8NA42 475 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 OR2T35Q8NGX2 323 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 OR1S1Q8NH92 325 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 VSTM2AQ8TAG5 236 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 THAP6Q8TBB0 222 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 DDB2Q92466 427 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 R3HDM4Q96D70 268 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 C5orf30Q96GV9 206 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 SEC22AQ96IW7 307 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 TSNAXQ99598 290 aaKnown RBP5.21□□□□□ -1.58
SPG11-221ENST00000560299 MRPL20Q9BYC9 149 aaKnown RBP5.21□□□□□ -1.58
SPG11-221ENST00000560299 RANGRFQ9HD47 186 aaPredicted RBP5.21□□□□□ -1.58
SPG11-221ENST00000560299 PRR13Q9NZ81 148 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 GSKIPQ9P0R6 139 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 ZNRD1Q9P1U0 126 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 FAM96BQ9Y3D0 163 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 HILPDAQ9Y5L2 63 aa5.21□□□□□ -1.58
SPG11-221ENST00000560299 CR1P17927 2039 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 KRTAP9-6A0A140TA67 174 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 A0A1W2PRD5 423 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 A0A1W2PRF3 423 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 A0A1W2PRM7 423 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 A8MV72 311 aaPredicted RBP5.2□□□□□ -1.58
SPG11-221ENST00000560299 WRBO00258 174 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 CCSO14618 274 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 ST8SIA3O43173 380 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 RAMP3O60896 148 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 MED6O75586 246 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 S1PR2O95136 353 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 LY86O95711 162 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 FAM106CPP0CH98 169 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 PVALBP20472 110 aaPredicted RBP5.2□□□□□ -1.58
SPG11-221ENST00000560299 PSMB6P28072 239 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 SAA4P35542 130 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 G6PCP35575 357 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 NUP62P37198 522 aaPredicted RBP5.2□□□□□ -1.58
SPG11-221ENST00000560299 DLX1P56177 255 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 H2BFSP57053 126 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 SCGB2A2Q13296 93 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 C2orf68Q2NKX9 166 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 TUSC1Q2TAM9 212 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 VMA21Q3ZAQ7 101 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 TMEM177Q53S58 311 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 CLEC9AQ6UXN8 241 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 C1orf229Q6ZS94 237 aaPredicted RBP5.2□□□□□ -1.58
SPG11-221ENST00000560299 CIARTQ8N365 385 aaPredicted RBP5.2□□□□□ -1.58
SPG11-221ENST00000560299 ZBTB8BQ8NAP8 495 aaPredicted RBP5.2□□□□□ -1.58
SPG11-221ENST00000560299 MAPK1IP1LQ8NDC0 245 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 OR4A16Q8NH70 328 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 OR4A5Q8NH83 315 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 LHFPL5Q8TAF8 219 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 NANPQ8TBE9 248 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 ST6GAL2Q96JF0 529 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 RHOVQ96L33 236 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 HYLS1Q96M11 299 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 HARBI1Q96MB7 349 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 CLCC1Q96S66 551 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 MS4A7Q9GZW8 240 aaPredicted RBP5.2□□□□□ -1.58
SPG11-221ENST00000560299 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.2□□□□□ -1.58
SPG11-221ENST00000560299 COA4Q9NYJ1 87 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 FKBP11Q9NYL4 201 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 CDC42EP3Q9UKI2 254 aa5.2□□□□□ -1.58
SPG11-221ENST00000560299 TRAV40A0A0B4J280 105 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 FAM90A26D6RGX4 464 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 TIMM23O14925 209 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 SMAD7O15105 426 aaKnown RBP5.19□□□□□ -1.58
SPG11-221ENST00000560299 LY6G6DO95868 133 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 MOSP00540 346 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 IGKV1-39P01597 117 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 C1QBP02746 253 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 IGKV1D-39P04432 117 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 FBP1P09467 338 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 C4BPBP20851 252 aa5.19□□□□□ -1.58
SPG11-221ENST00000560299 NKX2-1P43699 371 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms