RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 CD300CQ08708 224 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 GNMTQ14749 295 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 LTC4SQ16873 150 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 ANKRD55Q3KP44 614 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 DRAM1Q8N682 238 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 C8orf31Q8N9H6 132 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 GLYATL2Q8WU03 294 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 AJUBAQ96IF1 538 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 AGMATQ9BSE5 352 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 PDCD10Q9BUL8 212 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 MEGF9Q9H1U4 602 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 ZNF702PQ9H963 129 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 COMMD9Q9P000 198 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 PSG11Q9UQ72 335 aa16.42■□□□□ 0.22
PSEN1-225ENST00000560005 C5orf51A6NDU8 294 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 BOLA2-SMG1P6H3BVE0 249 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 M0R1W7 72 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 ATG12O94817 140 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 RPA2P15927 270 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 NFYBP25208 207 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 UCP1P25874 307 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 ZNF273Q14593 569 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 HCP5Q6MZN7 132 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 NOXA1Q86UR1 476 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 WFDC9Q8NEX5 89 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 TMEM56Q96MV1 263 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 ABHD14AQ9BUJ0 271 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 PIPOXQ9P0Z9 390 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 TMED3Q9Y3Q3 217 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 TMEM56-RWDD3S4R434 201 aa16.41■□□□□ 0.22
PSEN1-225ENST00000560005 WI2-2373I1.2A0A1W2PRP0 233 aa16.4■□□□□ 0.22
PSEN1-225ENST00000560005 C17orf98A8MV24 154 aa16.4■□□□□ 0.22
PSEN1-225ENST00000560005 SERPINE2P07093 398 aa16.4■□□□□ 0.22
PSEN1-225ENST00000560005 CD69Q07108 199 aa16.4■□□□□ 0.22
PSEN1-225ENST00000560005 ZNF695Q8IW36 515 aa16.4■□□□□ 0.22
PSEN1-225ENST00000560005 OR2T35Q8NGX2 323 aa16.4■□□□□ 0.22
PSEN1-225ENST00000560005 CD300LFQ8TDQ1 290 aa16.4■□□□□ 0.22
PSEN1-225ENST00000560005 NMES1Q9C002 83 aa16.4■□□□□ 0.22
PSEN1-225ENST00000560005 PARP12Q9H0J9 701 aaKnown RBP16.4■□□□□ 0.22
PSEN1-225ENST00000560005 RNF150Q9ULK6 438 aa16.4■□□□□ 0.22
PSEN1-225ENST00000560005 FAM25EA8MYX2 175 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 RAB29O14966 203 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 CDS2O95674 445 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 IGLV2-14P01704 120 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 H2BFSP57053 126 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 AANATQ16613 207 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 SP6Q3SY56 376 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 WIPF2Q8TF74 440 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-225ENST00000560005 ADTRPQ96IZ2 230 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 C2orf50Q96LR7 162 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 TP53RKQ96S44 253 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 ZFP57Q9NU63 452 aa16.39■□□□□ 0.21
PSEN1-225ENST00000560005 DYNC2H1Q8NCM8 4307 aaKnown RBP16.39■□□□□ 0.21
PSEN1-225ENST00000560005 EPPK1P58107 5090 aaKnown RBP16.38■□□□□ 0.21
PSEN1-225ENST00000560005 RYR2Q92736 4967 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 A0A087X0M5 115 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 C13orf42A0A1B0GVH6 325 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 A0A1B0GX30 115 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 MEX3AA1L020 520 aaKnown RBP16.38■□□□□ 0.21
PSEN1-225ENST00000560005 ST8SIA5O15466 376 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 DLX6P56179 175 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 PRAMEF5Q5TYX0 476 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 SLC25A48Q6ZT89 311 aaKnown RBP16.38■□□□□ 0.21
PSEN1-225ENST00000560005 LINC00311Q8N616 119 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 PIFOQ8TCI5 191 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 S1PR3Q99500 378 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 SPIN2AQ99865 258 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 SPIN2BQ9BPZ2 258 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 SESN1Q9Y6P5 492 aa16.38■□□□□ 0.21
PSEN1-225ENST00000560005 A0A1W2PRX2 142 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 TNFSF12O43508 249 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 SIX6O95475 246 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 HOXB5P09067 269 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 CCL3L1P16619 93 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 KIR2DS2P43631 304 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 KRTAP10-11P60412 298 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 CT45A1Q5HYN5 189 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 Q8N2B8 174 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 ZNF439Q8NDP4 499 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 CT45A3Q8NHU0 189 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 RBPMSQ93062 196 aaKnown RBP16.37■□□□□ 0.21
PSEN1-225ENST00000560005 SDHAF2Q9NX18 166 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 PRELID3BQ9Y3B1 194 aa16.37■□□□□ 0.21
PSEN1-225ENST00000560005 IGHV1-8P0DP01 117 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 VDAC1P21796 283 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 IL3RAP26951 378 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 PRRX1P54821 245 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 TMEM268Q5VZI3 342 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 GGNBP1Q5YKI7 109 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 SELENOHQ8IZQ5 122 aaKnown RBP16.36■□□□□ 0.21
PSEN1-225ENST00000560005 OR51H1Q8NH63 302 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 OR9G1Q8NH87 305 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 ZNF596Q8TC21 504 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 ABHD14BQ96IU4 210 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 IFI27L2Q9H2X8 130 aa16.36■□□□□ 0.21
PSEN1-225ENST00000560005 ZNF134P52741 427 aa16.35■□□□□ 0.21
PSEN1-225ENST00000560005 ERVFRD-1P60508 538 aa16.35■□□□□ 0.21
PSEN1-225ENST00000560005 TAGLNQ01995 201 aaKnown RBP16.35■□□□□ 0.21
PSEN1-225ENST00000560005 EIF4EBP1Q13541 118 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-225ENST00000560005 FAM71F2Q6NXP2 309 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms