RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LY6EQ16553 131 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 C2orf68Q2NKX9 166 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 FBLN7Q53RD9 439 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 GGNBP1Q5YKI7 109 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 C9orf139Q6ZV77 190 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 CADM3Q8N126 398 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 LRTM2Q8N967 370 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 OSR1Q8TAX0 266 aaPredicted RBP8.37□□□□□ -1.07
TPM1-221ENST00000559831 RRNAD1Q96FB5 475 aaKnown RBP8.37□□□□□ -1.07
TPM1-221ENST00000559831 EAF1Q96JC9 268 aaPredicted RBP8.37□□□□□ -1.07
TPM1-221ENST00000559831 TMEM160Q9NX00 188 aa8.37□□□□□ -1.07
TPM1-221ENST00000559831 TET2Q6N021 2002 aaPredicted RBP8.37□□□□□ -1.07
TPM1-221ENST00000559831 PIGBOS1A0A0B4J2F0 54 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 A0A0G2JRQ6 117 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 DUXBA0A1W2PPF3 345 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 DBX1A6NMT0 343 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 MARCH11A6NNE9 402 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 FAM90A9PA6NNJ1 464 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 SRRM4A7MD48 611 aaKnown RBP8.36□□□□□ -1.07
TPM1-221ENST00000559831 H3BUX3 64 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 SLC25A17O43808 307 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 SAA1P0DJI8 122 aaPredicted RBP8.36□□□□□ -1.07
TPM1-221ENST00000559831 BCAP31P51572 246 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 PLGLAQ15195 96 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 MMDQ15546 238 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 IZUMO4Q1ZYL8 232 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 VMA21Q3ZAQ7 101 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 GSG1LQ6UXU4 331 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 H2BFWTQ7Z2G1 175 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 LURAP1LQ8IV03 231 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 SIGLECL1Q8N7X8 197 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 GPR146Q96CH1 333 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 SEC22AQ96IW7 307 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 ZNF48Q96MX3 618 aaPredicted RBP8.36□□□□□ -1.07
TPM1-221ENST00000559831 TSNAXQ99598 290 aaKnown RBP8.36□□□□□ -1.07
TPM1-221ENST00000559831 PDCD10Q9BUL8 212 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 CHIAQ9BZP6 476 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 RAB18Q9NP72 206 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 TNFRSF19Q9NS68 423 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 TMEM140Q9NV12 185 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 TMED3Q9Y3Q3 217 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 MMP24Q9Y5R2 645 aa8.36□□□□□ -1.07
TPM1-221ENST00000559831 NAV3Q8IVL0 2385 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 OTOGQ6ZRI0 2925 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 BTBD17A6NE02 478 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 HMX3A6NHT5 357 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 NCBP2LA6PVI3 153 aaKnown RBP8.35□□□□□ -1.07
TPM1-221ENST00000559831 MPTX1A8MV57 137 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 INAFM1C9JVW0 142 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 RBMXL2O75526 392 aaKnown RBP8.35□□□□□ -1.07
TPM1-221ENST00000559831 IGLV2-23P01705 113 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 IGHV4-59P01825 116 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 OR9G9P0C7N8 305 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 SULT1A3P0DMM9 295 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 SULT1A4P0DMN0 295 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 SRD5A1P18405 259 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 CXCL3P19876 107 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 VDAC1P21796 283 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 LGALS7P47929 136 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 DYNLT3P51808 116 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 F2RL1P55085 397 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 EBI3Q14213 229 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 PSG5Q15238 335 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 THOC7Q6I9Y2 204 aaKnown RBP8.35□□□□□ -1.07
TPM1-221ENST00000559831 OR4A47Q6IF82 309 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 TMEM219Q86XT9 240 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 THNSL2Q86YJ6 484 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 OR11H7Q8NGC8 314 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 OR5M8Q8NGP6 311 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 LSM10Q969L4 123 aaKnown RBP8.35□□□□□ -1.07
TPM1-221ENST00000559831 OR10C1Q96KK4 312 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 RHOVQ96L33 236 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 RNF5Q99942 180 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 AIFM2Q9BRQ8 373 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 GSKIPQ9P0R6 139 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 KIAA1456Q9P272 454 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 METTL1Q9UBP6 276 aaKnown RBP8.35□□□□□ -1.07
TPM1-221ENST00000559831 CDC42EP3Q9UKI2 254 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 NSG2Q9Y328 171 aa8.35□□□□□ -1.07
TPM1-221ENST00000559831 HIVEP2P31629 2446 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 TRAV3A0A0B4J244 114 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 NBR2O15453 112 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 PLXNB1O43157 2135 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 NXPH3O95157 252 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 OR2B8PP59922 312 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 UBE2KP61086 200 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 SCGB2A2Q13296 93 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 AANATQ16613 207 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 POU2AF1Q16633 256 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 IAH1Q2TAA2 248 aaPredicted RBP8.34□□□□□ -1.07
TPM1-221ENST00000559831 NMSQ5H8A3 153 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 RBMS3Q6XE24 437 aaKnown RBP8.34□□□□□ -1.07
TPM1-221ENST00000559831 Q6YL49 198 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 FAM219AQ8IW50 185 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 Q8N6K4 173 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 OR4A16Q8NH70 328 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 OR1S1Q8NH92 325 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 VSTM2AQ8TAG5 236 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 PIFOQ8TCI5 191 aa8.34□□□□□ -1.07
TPM1-221ENST00000559831 CLCC1Q96S66 551 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms