RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TMEM241Q24JQ0 296 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 OR5T1Q8NG75 326 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 MBD3L2Q8NHZ7 208 aaPredicted RBP8.31□□□□□ -1.08
LRRC28-216ENST00000559819 EDARADDQ8WWZ3 215 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 GGACTQ9BVM4 153 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 ELOVL1Q9BW60 279 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 TUBG2Q9NRH3 451 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 JPT1Q9UK76 154 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 LAMP3Q9UQV4 416 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 K7EM74 188 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 HPRT1P00492 218 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 IFNA10P01566 189 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 UBE2G2P60604 165 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 TRAT1Q6PIZ9 186 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 CYP2G1PQ6ZSU1 146 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 C22orf34Q6ZV56 151 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 ZADH2Q8N4Q0 377 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 OR4A16Q8NH70 328 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 GPR61Q9BZJ8 451 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 CALYQ9NYX4 217 aa8.31□□□□□ -1.08
LRRC28-216ENST00000559819 BOD1L1Q8NFC6 3051 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 TRBV23-1A0A0A0MS06 115 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 MBP02144 154 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 MYOD1P15172 320 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 GZMHP20718 246 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 NPPCP23582 126 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 CD1BP29016 333 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 CDC34P49427 236 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-216ENST00000559819 NKX6-1P78426 367 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-216ENST00000559819 MZT1Q08AG7 82 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 C17orf58Q2M2W7 97 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 BSXQ3C1V8 233 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 PYY3Q5JQD4 70 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 ABHD12Q8N2K0 398 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 DEFB108BQ8NET1 73 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 TMEM170AQ8WVE7 144 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 PATZ1Q9HBE1 687 aaKnown RBP8.3□□□□□ -1.08
LRRC28-216ENST00000559819 TMEM242Q9NWH2 141 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 C17orf112F2Z3M2 114 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 YPEL1O60688 119 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 CEACAM4O75871 244 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 KLF3P57682 345 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-216ENST00000559819 RELBQ01201 579 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 PAX5Q02548 391 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 PMS2P11Q13670 270 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 TGIF2LYQ8IUE0 185 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 OR10D4PQ8NGN7 298 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 SDSLQ96GA7 329 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 YPEL2Q96QA6 119 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 OR51M1Q9H341 326 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 HEYLQ9NQ87 328 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-216ENST00000559819 TMEM140Q9NV12 185 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 AURKAIP1Q9NWT8 199 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-216ENST00000559819 GAB2Q9UQC2 676 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 WDR83OSQ9Y284 106 aa8.3□□□□□ -1.08
LRRC28-216ENST00000559819 CNOT1A5YKK6 2376 aaKnown RBP8.29□□□□□ -1.08
LRRC28-216ENST00000559819 F2RL2O00254 374 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 PHOX2AO14813 284 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 GYPAP02724 150 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 OPN1MWP04001 364 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 OPN1MW2P0DN77 364 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 OPN1MW3P0DN78 364 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 VDAC2P45880 294 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-216ENST00000559819 ATP5G3P48201 142 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 OR51G1Q8NGK1 321 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 S1PR3Q99500 378 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 MS4A5Q9H3V2 200 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 DCAF16Q9NXF7 216 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 SMG1Q96Q15 3661 aaKnown RBP8.29□□□□□ -1.08
LRRC28-216ENST00000559819 DMXL1Q9Y485 3027 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 C11orf94C9JXX5 98 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 LHBP01229 141 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 PFN1P07737 140 aaKnown RBP8.29□□□□□ -1.08
LRRC28-216ENST00000559819 S100A2P29034 98 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 SPCS3P61009 180 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 ACOT6Q3I5F7 207 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-216ENST00000559819 CT45A1Q5HYN5 189 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 CT45A3Q8NHU0 189 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 PPP1R35Q8TAP8 253 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 SNRNP40Q96DI7 357 aaKnown RBP8.29□□□□□ -1.08
LRRC28-216ENST00000559819 CTDSP1Q9GZU7 261 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 MANBALQ9NQG1 85 aa8.29□□□□□ -1.08
LRRC28-216ENST00000559819 GAR1Q9NY12 217 aaKnown RBP8.29□□□□□ -1.08
LRRC28-216ENST00000559819 TRBV24-1A0A075B6N3 115 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 TMEM250H0YL14 139 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 GFRA3O60609 400 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 GLRXP35754 106 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 GALR1P47211 349 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 GNG10P50151 68 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 ERVK-16P61578 105 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 FAM27E3Q08E93 113 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 CR1LQ2VPA4 569 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 TIMM23BQ5SRD1 257 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 MIC13Q5XKP0 118 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 TREML4Q6UXN2 200 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 FAM169BQ8N8A8 192 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 OR13D1Q8NGV5 346 aa8.28□□□□□ -1.08
LRRC28-216ENST00000559819 NEIL1Q96FI4 390 aaPredicted RBP8.28□□□□□ -1.08
LRRC28-216ENST00000559819 MGST2Q99735 147 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms