RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 HES5Q5TA89 166 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 SLC25A48Q6ZT89 311 aaKnown RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 SBSPONQ8IVN8 264 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 ODF3L1Q8IXM7 274 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 ZNF491Q8N8L2 437 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 OR11H1Q8NG94 326 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 OR5M8Q8NGP6 311 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 OR2T10Q8NGZ9 312 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 OR52I2Q8NH67 350 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 OR1L1Q8NH94 360 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 C4orf3Q8WVX3 66 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 TSEN15Q8WW01 171 aaKnown RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 ARL11Q969Q4 196 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 FAM3DQ96BQ1 224 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 FYTTD1Q96QD9 318 aaKnown RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 SLC25A21Q9BQT8 299 aaPredicted RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 C20orf85Q9H1P6 137 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 RCC2Q9P258 522 aaKnown RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 SCP2D1Q9UJQ7 156 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 ZNF256Q9Y2P7 627 aaPredicted RBP4.49□□□□□ -1.69
USP3-215ENST00000559771 FBXO7Q9Y3I1 522 aa4.49□□□□□ -1.69
USP3-215ENST00000559771 BIRC6Q9NR09 4857 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 TRAV8-7A0A075B6U6 113 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 IGHV7-81A0A0B4J1V7 117 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 UBE2QL1A1L167 161 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 KRTAP29-1A8MX34 341 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 C3orf84H3BNL1 204 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 LDLRAD4O15165 306 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 SOX15O60248 233 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 CREBL2O60519 120 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 ZNF780AO75290 641 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 GIPP09681 153 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 UBBP0CG47 229 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 AKAIN1P0CW23 69 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 RCC1P18754 421 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 SERPINA2P20848 420 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 HTR2CP28335 458 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 ZNF93P35789 620 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 NKX2-5P52952 324 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 TAS2R19P59542 299 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 RAP2BP61225 183 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 NDPQ00604 133 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 RUNX1Q01196 453 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 GNMTQ14749 295 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 MEF2DQ14814 521 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 ARL6IP1Q15041 203 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 MPV17LQ2QL34 196 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 C2orf76Q3KRA6 126 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 ZNF260Q3ZCT1 412 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 Q3ZCU0 254 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 CXorf66Q5JRM2 361 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 SIGIRRQ6IA17 410 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 GLDNQ6ZMI3 551 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 TMEM229BQ8NBD8 167 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 GPX8Q8TED1 209 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 CLUHP3Q96NS8 147 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 GPER1Q99527 375 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 ZNF436Q9C0F3 470 aaPredicted RBP4.48□□□□□ -1.69
USP3-215ENST00000559771 METTL9Q9H1A3 318 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 TMEM138Q9NPI0 162 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 GHRLQ9UBU3 117 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 RAB22AQ9UL26 194 aa4.48□□□□□ -1.69
USP3-215ENST00000559771 TRAV6A0A075B6T7 132 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 A0A0B4J203 849 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 ATP6V0E1O15342 81 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 FABP7O15540 132 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 SSNA1O43805 119 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 OR2A4O95047 310 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 IFNA7P01567 189 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 HBZP02008 142 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 MAS1P04201 325 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 EGR2P11161 476 aaPredicted RBP4.47□□□□□ -1.69
USP3-215ENST00000559771 VDAC1P21796 283 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 BDKRB2P30411 391 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 GNG2P59768 71 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 SUMO1P63165 101 aaKnown RBP4.47□□□□□ -1.69
USP3-215ENST00000559771 DHODHQ02127 395 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 FCN2Q15485 313 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 SLC22A6Q4U2R8 563 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 MORN2Q502X0 79 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 LPCAT3Q6P1A2 487 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 LINC00596Q86U02 117 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 C9orf62Q8N4C0 152 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 UXS1Q8NBZ7 420 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 OR11H7Q8NGC8 314 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 OR8H1Q8NGG4 311 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 OR52L2PQ8NGH6 319 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 OR10V1Q8NGI7 309 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 OR1N2Q8NGR9 330 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 OR4K15Q8NH41 348 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 MUC7Q8TAX7 377 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 ZNF431Q8TF32 576 aaPredicted RBP4.47□□□□□ -1.69
USP3-215ENST00000559771 CASTOR1Q8WTX7 329 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 GIMAP1Q8WWP7 306 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 DCUN1D4Q92564 292 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 DLX4Q92988 240 aaPredicted RBP4.47□□□□□ -1.69
USP3-215ENST00000559771 UBE2E2Q96LR5 201 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 OR5B12Q96R08 314 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 OR2A7Q96R45 310 aa4.47□□□□□ -1.69
USP3-215ENST00000559771 RASL11BQ9BPW5 248 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms