RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 PSG3Q16557 428 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 CEACAM21Q3KPI0 293 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 SLC25A34Q6PIV7 304 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 LHFPL4Q7Z7J7 247 aa13.58□□□□□ -0.23
HMBOX1-212ENST00000558662 TNRC6AQ8NDV7 1962 aaKnown RBP13.58□□□□□ -0.24
HMBOX1-212ENST00000558662 IZUMO1RA6ND01 250 aa13.58□□□□□ -0.24
HMBOX1-212ENST00000558662 FAM90A9PA6NNJ1 464 aa13.58□□□□□ -0.24
HMBOX1-212ENST00000558662 CLDN14O95500 239 aa13.58□□□□□ -0.24
HMBOX1-212ENST00000558662 SEC11AP67812 179 aa13.58□□□□□ -0.24
HMBOX1-212ENST00000558662 TMEM70Q9BUB7 260 aa13.58□□□□□ -0.24
HMBOX1-212ENST00000558662 G3V4G9 280 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 IGLC1P0CG04 106 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 SMIM17P0DL12 118 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 CRYBB3P26998 211 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 GCHFRP30047 84 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 HIST1H1AQ02539 215 aaPredicted RBP13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 RTL8BQ17RB0 113 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 NRN1LQ496H8 165 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 MEGF9Q9H1U4 602 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 ZNF331Q9NQX6 463 aaPredicted RBP13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 PPP1R3CQ9UQK1 317 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 RNF24Q9Y225 148 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 SPAG17Q6Q759 2223 aa13.57□□□□□ -0.24
HMBOX1-212ENST00000558662 ATXN8OSP0DMR3 200 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 ARL4DP49703 201 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 GNG4P50150 75 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 MLF1P58340 268 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 MAJINQ3KP22 176 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 TIGITQ495A1 244 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 VHLLQ6RSH7 139 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 COLCA1Q6ZS62 124 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 Q6ZVH6 145 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 OR2H1Q9GZK4 316 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 OR2D2Q9H210 308 aa13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 SLC25A10Q9UBX3 287 aaPredicted RBP13.56□□□□□ -0.24
HMBOX1-212ENST00000558662 IGLV3-12A0A075B6K2 115 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 A0A0C4DFX4 3053 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 ODAMA1E959 279 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 GJE1A6NN92 205 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 OR2J3O76001 311 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 ZFAND5O76080 213 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 CGAP01215 116 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 ZNF32P17041 273 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 PDLIM3Q53GG5 364 aaPredicted RBP13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 MPV17L2Q567V2 206 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 AMMECR1LQ6DCA0 310 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 ANKRD37Q7Z713 158 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 DRAM1Q8N682 238 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 ZNF645Q8N7E2 425 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 LMX1AQ8TE12 382 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 ABHD3Q8WU67 409 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 TMEM45BQ96B21 275 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 SPACA9Q96E40 222 aaPredicted RBP13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 CHRDL1Q9BU40 450 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 GP6Q9HCN6 339 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 KCNS2Q9ULS6 477 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 WASHC3Q9Y3C0 194 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 TRAV38-1A0A0B4J264 116 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 C2orf70A6NJV1 201 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 C5orf67F2Z3F1 127 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 M0R2Z0 102 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 OR7C2O60412 319 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 ZNF16P17020 682 aaPredicted RBP13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 NTF3P20783 257 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 GFERP55789 205 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 RBPJQ06330 500 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 C17orf82Q86X59 251 aaPredicted RBP13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 TAAR6Q96RI8 345 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 LRRC61Q9BV99 259 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 TMEM167BQ9NRX6 74 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 C19orf25Q9UFG5 118 aaPredicted RBP13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 KIAA1549Q9HCM3 1950 aa13.55□□□□□ -0.24
HMBOX1-212ENST00000558662 NUDT3O95989 172 aa13.54□□□□□ -0.24
HMBOX1-212ENST00000558662 MRPS21P82921 87 aaKnown RBP13.54□□□□□ -0.24
HMBOX1-212ENST00000558662 PSG9Q00887 426 aa13.54□□□□□ -0.24
HMBOX1-212ENST00000558662 PRAMEF20Q5VT98 475 aa13.54□□□□□ -0.24
HMBOX1-212ENST00000558662 OR1L3Q8NH93 324 aa13.54□□□□□ -0.24
HMBOX1-212ENST00000558662 TMEM191AQ9H0A3 160 aa13.54□□□□□ -0.24
HMBOX1-212ENST00000558662 OR51B2Q9Y5P1 312 aa13.54□□□□□ -0.24
HMBOX1-212ENST00000558662 HELTA6NFD8 242 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 OR5AL1P0C617 328 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 C1orf61Q13536 156 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 IGFBP7Q16270 282 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 FER1L6-AS1Q8NA97 138 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 PKIBQ9C010 78 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 YTHDF2Q9Y5A9 579 aaKnown RBP13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 OR2T8A6NH00 312 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 C15orf62A8K5M9 175 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 ZG16O60844 167 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 CYC1P08574 325 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 USF1P22415 310 aaPredicted RBP13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 Q56UQ5 140 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 CHCHD1Q96BP2 118 aaKnown RBP13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 OR2V2Q96R30 315 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 PLA2G2FQ9BZM2 168 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 IL23AQ9NPF7 189 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 DLL3Q9NYJ7 618 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 SH3BGRL2Q9UJC5 107 aa13.53□□□□□ -0.24
HMBOX1-212ENST00000558662 KIAA0100Q14667 2235 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms