RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 MARC2Q969Z3 335 aa13.22□□□□□ -0.29
TSPAN3-204ENST00000558394 EEF1AKMT3Q96AZ1 226 aa13.22□□□□□ -0.29
TSPAN3-204ENST00000558394 C9orf16Q9BUW7 83 aa13.22□□□□□ -0.29
TSPAN3-204ENST00000558394 KCNK15Q9H427 330 aa13.22□□□□□ -0.29
TSPAN3-204ENST00000558394 ZNF430Q9H8G1 570 aaPredicted RBP13.22□□□□□ -0.29
TSPAN3-204ENST00000558394 IGKV1-6A0A0C4DH72 117 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 BET1O15155 118 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 SOCS1O15524 211 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 DHFRP00374 187 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 TCTAP57738 103 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 PRR20EP86478 221 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 PRR20CP86479 221 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 PRR20DP86480 221 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 PRR20BP86481 221 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 PRR20AP86496 221 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 ZNF585BQ52M93 769 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 RBM48Q5RL73 367 aaKnown RBP13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 LINC00336Q6ZUF6 198 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 OR4A4PQ8NGN8 299 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 OR10J5Q8NHC4 309 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 C11orf45Q8TAV5 145 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 C2CD4CQ8TF44 421 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 SPAG8Q99932 426 aaPredicted RBP13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 DCUN1D5Q9BTE7 237 aa13.21□□□□□ -0.29
TSPAN3-204ENST00000558394 MUC4Q99102 2169 aa13.21□□□□□ -0.3
TSPAN3-204ENST00000558394 A0A0A6YYD4 124 aa13.2□□□□□ -0.3
TSPAN3-204ENST00000558394 TMEM14DPA8MWL7 114 aa13.2□□□□□ -0.3
TSPAN3-204ENST00000558394 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-204ENST00000558394 CDK10Q15131 360 aa13.2□□□□□ -0.3
TSPAN3-204ENST00000558394 C1orf100Q5SVJ3 147 aa13.2□□□□□ -0.3
TSPAN3-204ENST00000558394 C10orf55Q5SWW7 151 aa13.2□□□□□ -0.3
TSPAN3-204ENST00000558394 MRPL27Q9P0M9 148 aaKnown RBP13.2□□□□□ -0.3
TSPAN3-204ENST00000558394 HSF4Q9ULV5 492 aa13.2□□□□□ -0.3
TSPAN3-204ENST00000558394 S4R3C0 116 aa13.2□□□□□ -0.3
TSPAN3-204ENST00000558394 HMX3A6NHT5 357 aa13.19□□□□□ -0.3
TSPAN3-204ENST00000558394 FABP7O15540 132 aa13.19□□□□□ -0.3
TSPAN3-204ENST00000558394 SAA1P0DJI8 122 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-204ENST00000558394 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
TSPAN3-204ENST00000558394 ZFP1Q6P2D0 407 aa13.19□□□□□ -0.3
TSPAN3-204ENST00000558394 CEACAM19Q7Z692 300 aa13.19□□□□□ -0.3
TSPAN3-204ENST00000558394 CCDC140Q96MF4 163 aa13.19□□□□□ -0.3
TSPAN3-204ENST00000558394 C6orf62Q9GZU0 229 aaPredicted RBP13.19□□□□□ -0.3
TSPAN3-204ENST00000558394 LPAR5Q9H1C0 372 aa13.19□□□□□ -0.3
TSPAN3-204ENST00000558394 NPIPB5A8MRT5 1133 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 CD1AP06126 327 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 CD3GP09693 182 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 CTRB1P17538 263 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 ZNF485Q8NCK3 441 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 GALNT14Q96FL9 552 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 ARHGAP5-AS1Q96IT6 56 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 FYTTD1Q96QD9 318 aaKnown RBP13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 UFC1Q9Y3C8 167 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 VPS13DQ5THJ4 4388 aa13.18□□□□□ -0.3
TSPAN3-204ENST00000558394 MYL12BO14950 172 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 XRCC3O43542 346 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 MYOD1P15172 320 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 HIST1H1BP16401 226 aaKnown RBP13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 GALP22466 123 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 DUTP33316 252 aaKnown RBP13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 QRFPP83859 136 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 ACSM3Q53FZ2 586 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 LAMTOR1Q6IAA8 161 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 OR6M1Q8NGM8 313 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 PHYHIPQ92561 330 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 RARRES2Q99969 163 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 GINS4Q9BRT9 223 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 C5orf66Q9H5L9 145 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
TSPAN3-204ENST00000558394 TRBV7-1A0A0A6YYK4 115 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 EFCAB10A6NFE3 127 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 FCGR3BO75015 233 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 CLEC3BP05452 202 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 C8orf88P0DMB2 117 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 DEFA4P12838 97 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 RPL27AP46776 148 aaKnown RBP13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 ELLP55199 621 aaPredicted RBP13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 ST3GAL4Q11206 333 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 IGSF11Q5DX21 431 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 UNQ9165/PRO28630Q6UXU0 137 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 LRRTM1Q86UE6 522 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 FAM89BQ8N5H3 189 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 C5orf30Q96GV9 206 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 CXorf58Q96LI9 332 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 PECRQ9BY49 303 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 OR51E2Q9H255 320 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 PLGRKTQ9HBL7 147 aa13.16□□□□□ -0.3
TSPAN3-204ENST00000558394 LINC00473A8K010 186 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 IGLL5B9A064 214 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 TSPAN4O14817 238 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 FCGR2BP31994 310 aaPredicted RBP13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 WNT4P56705 351 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 INSL4Q14641 139 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 C19orf35Q6ZS72 473 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 MS4A15Q8N5U1 240 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 OR5B3Q8NH48 314 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 VSTM2AQ8TAG5 236 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 CABLES2Q9BTV7 478 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 SLC2A9Q9NRM0 540 aa13.15□□□□□ -0.3
TSPAN3-204ENST00000558394 MRPS7Q9Y2R9 242 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms