RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 C13orf42A0A1B0GVH6 325 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 MEIS3P1A6NDR6 274 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 SAA1P0DJI8 122 aaPredicted RBP12.87□□□□□ -0.35
NEDD4-212ENST00000557845 APELAP0DMC3 54 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 BRWD1-AS2P59051 145 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 DCTN2Q13561 401 aaKnown RBP12.87□□□□□ -0.35
NEDD4-212ENST00000557845 ZNF66Q6ZN08 573 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 SAMD12Q8N8I0 201 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 OR5AP2Q8NGF4 316 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 OR13F1Q8NGS4 319 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 SECTM1Q8WVN6 248 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 TCTEX1D2Q8WW35 142 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 SRSF12Q8WXF0 261 aaKnown RBP12.87□□□□□ -0.35
NEDD4-212ENST00000557845 ACOT12Q8WYK0 555 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 SNAPC3Q92966 411 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 PRR25Q96S07 402 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 FUNDC2Q9BWH2 189 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 TINAGL1Q9GZM7 467 aaPredicted RBP12.87□□□□□ -0.35
NEDD4-212ENST00000557845 ZNF430Q9H8G1 570 aaPredicted RBP12.87□□□□□ -0.35
NEDD4-212ENST00000557845 RANGRFQ9HD47 186 aaPredicted RBP12.87□□□□□ -0.35
NEDD4-212ENST00000557845 CCL28Q9NRJ3 127 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 TAS2R8Q9NYW2 309 aa12.87□□□□□ -0.35
NEDD4-212ENST00000557845 LSM4Q9Y4Z0 139 aaKnown RBP12.87□□□□□ -0.35
NEDD4-212ENST00000557845 ACTL6BO94805 426 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 PPYP01298 95 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 MSMO1Q15800 293 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 ACSM6Q6P461 480 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 MMD2Q8IY49 270 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 VKORC1L1Q8N0U8 176 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 OR4S2Q8NH73 311 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 GIMAP1Q8WWP7 306 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 GPHA2Q96T91 129 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 B9D2Q9BPU9 175 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 COA4Q9NYJ1 87 aa12.86□□□□□ -0.35
NEDD4-212ENST00000557845 ZNF256Q9Y2P7 627 aaPredicted RBP12.86□□□□□ -0.35
NEDD4-212ENST00000557845 TNCP24821 2201 aa12.85□□□□□ -0.35
NEDD4-212ENST00000557845 CREBL2O60519 120 aaPredicted RBP12.85□□□□□ -0.35
NEDD4-212ENST00000557845 SAP30O75446 220 aa12.85□□□□□ -0.35
NEDD4-212ENST00000557845 OR9G9P0C7N8 305 aa12.85□□□□□ -0.35
NEDD4-212ENST00000557845 NCS1P62166 190 aa12.85□□□□□ -0.35
NEDD4-212ENST00000557845 CD69Q07108 199 aa12.85□□□□□ -0.35
NEDD4-212ENST00000557845 TMEM69Q5SWH9 247 aa12.85□□□□□ -0.35
NEDD4-212ENST00000557845 ZBTB34Q8NCN2 500 aa12.85□□□□□ -0.35
NEDD4-212ENST00000557845 ADAD2Q8NCV1 583 aaKnown RBP12.85□□□□□ -0.35
NEDD4-212ENST00000557845 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
NEDD4-212ENST00000557845 IFT46Q9NQC8 304 aa12.85□□□□□ -0.35
NEDD4-212ENST00000557845 DNAH9Q9NYC9 4486 aa12.85□□□□□ -0.35
NEDD4-212ENST00000557845 ANKRD34BA5PLL1 514 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 MPPED1O15442 326 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 TNFSF12O43508 249 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 OR2A4O95047 310 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 TAS2R20P59543 309 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 VBP1P61758 197 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 VSTM2AQ8TAG5 236 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 USMG5Q96IX5 58 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 OR2A7Q96R45 310 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 SPIN2AQ99865 258 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 SPIN2BQ9BPZ2 258 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 SLC5A7Q9GZV3 580 aa12.84□□□□□ -0.35
NEDD4-212ENST00000557845 KBTBD11O94819 623 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 HRASP01112 189 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 ZP3P21754 424 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 KIR2DS2P43631 304 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 FXYD4P59646 89 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 DEFA5Q01523 94 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 DYRK1AQ13627 763 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 ZNF343Q6P1L6 599 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 DHRS11Q6UWP2 260 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 PUSL1Q8N0Z8 303 aaKnown RBP12.83□□□□□ -0.36
NEDD4-212ENST00000557845 TTC9CQ8N5M4 171 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 TMEM167AQ8TBQ9 72 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 CMTM3Q96MX0 182 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 COMMD3Q9UBI1 195 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 ANAPC10Q9UM13 185 aa12.83□□□□□ -0.36
NEDD4-212ENST00000557845 RBMXL2O75526 392 aaKnown RBP12.82□□□□□ -0.36
NEDD4-212ENST00000557845 LY86O95711 162 aa12.82□□□□□ -0.36
NEDD4-212ENST00000557845 EIF4EP06730 217 aaKnown RBP12.82□□□□□ -0.36
NEDD4-212ENST00000557845 NAT1P18440 290 aa12.82□□□□□ -0.36
NEDD4-212ENST00000557845 PRSS3P35030 304 aa12.82□□□□□ -0.36
NEDD4-212ENST00000557845 RFX2P48378 723 aa12.82□□□□□ -0.36
NEDD4-212ENST00000557845 VAX1Q5SQQ9 334 aa12.82□□□□□ -0.36
NEDD4-212ENST00000557845 C10orf55Q5SWW7 151 aa12.82□□□□□ -0.36
NEDD4-212ENST00000557845 SPAG16Q8N0X2 631 aa12.82□□□□□ -0.36
NEDD4-212ENST00000557845 OR4C12Q96R67 309 aa12.82□□□□□ -0.36
NEDD4-212ENST00000557845 EHFQ9NZC4 300 aa12.82□□□□□ -0.36
NEDD4-212ENST00000557845 PEF1Q9UBV8 284 aaKnown RBP12.82□□□□□ -0.36
NEDD4-212ENST00000557845 TRBV9A0A0B4J1U6 114 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 SMIM31A0A1B0GVY4 71 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 SULT1C2O00338 296 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 PRH1P02810 166 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 GNRHRP30968 328 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 MAS1LP35410 378 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 KLF5Q13887 457 aaPredicted RBP12.81□□□□□ -0.36
NEDD4-212ENST00000557845 C11orf87Q6NUJ2 197 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 ZNF818PQ6ZRF7 136 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 SSX9Q7RTT3 188 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 OR6Q1Q8NGQ2 317 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 AIFM2Q9BRQ8 373 aa12.81□□□□□ -0.36
NEDD4-212ENST00000557845 ELOVL1Q9BW60 279 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms