RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 DEFA6Q01524 100 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 GNA12Q03113 381 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 NUP160Q12769 1436 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 GLT8D1Q68CQ7 371 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 SMARCD3Q6STE5 483 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 RASL11AQ6T310 242 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 SDIM1Q6ZPB5 146 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 TMEM136Q6ZRR5 245 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 C1orf174Q8IYL3 243 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 OR6V1Q8N148 313 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 TMEM86BQ8N661 226 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 PXT1Q8NFP0 134 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 OR11H1Q8NG94 326 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 OR51D1Q8NGF3 324 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 OR4K13Q8NH42 304 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 MCFD2Q8NI22 146 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 GNPNAT1Q96EK6 184 aaPredicted RBP1.19□□□□□ -2.22
GPHN-216ENST00000557678 SFRP2Q96HF1 295 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 CEP19Q96LK0 163 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 CNBD2Q96M20 576 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 PHB2Q99623 299 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 UPK3BQ9BT76 320 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 C9orf16Q9BUW7 83 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 KIFC1Q9BW19 673 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 ULBP3Q9BZM4 244 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 COMMD5Q9GZQ3 224 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 DCSTAMPQ9H295 470 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 XAGE1AQ9HD64 81 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 ZNF230Q9UIE0 474 aaPredicted RBP1.19□□□□□ -2.22
GPHN-216ENST00000557678 SAMHD1Q9Y3Z3 626 aaKnown RBP1.19□□□□□ -2.22
GPHN-216ENST00000557678 RTL1A6NKG5 1358 aa1.19□□□□□ -2.22
GPHN-216ENST00000557678 ZNF532Q9HCE3 1301 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 PCF11O94913 1555 aaKnown RBP1.18□□□□□ -2.22
GPHN-216ENST00000557678 KNCNA6PVL3 124 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 BHLHE40O14503 412 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 COX7A2LO14548 114 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 OR5F1O95221 314 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 CPSF4O95639 269 aaKnown RBP1.18□□□□□ -2.22
GPHN-216ENST00000557678 CDS2O95674 445 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 CRYGDP07320 174 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 CST2P09228 141 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 CCL1P22362 96 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 CRHBPP24387 322 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 LPAR6P43657 344 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 TSPEAR-AS2P59090 65 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 VBP1P61758 197 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 AKR1C1Q04828 323 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 IL15RAQ13261 267 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 POU6F1Q14863 301 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 CDK10Q15131 360 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 GRK1Q15835 563 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 ZNF141Q15928 474 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 IAH1Q2TAA2 248 aaPredicted RBP1.18□□□□□ -2.22
GPHN-216ENST00000557678 LPCAT3Q6P1A2 487 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 TMED4Q7Z7H5 227 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 OOSP2Q86WS3 158 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 UMODL1-AS1Q8N2C9 162 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 Q8NAQ8 132 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 OR10P1Q8NGE3 313 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 MUC7Q8TAX7 377 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 RAB2BQ8WUD1 216 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 RAD51AP1Q96B01 352 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 OR52B2Q96RD2 323 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 SIGMAR1Q99720 223 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 C11orf1Q9H5F2 150 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 ATPIF1Q9UII2 106 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 MCTS1Q9ULC4 181 aaKnown RBP1.18□□□□□ -2.22
GPHN-216ENST00000557678 V9GYQ6 96 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 SHANK1Q9Y566 2161 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 ADAMTSL1Q8N6G6 1762 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 NUP155O75694 1391 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 ROCK1Q13464 1354 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 DOCK5Q9H7D0 1870 aa1.18□□□□□ -2.22
GPHN-216ENST00000557678 SEC16AO15027 2179 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 ZFYVE9O95405 1425 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 A0A087WUU8 490 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 IGKV2-24A0A0C4DH68 120 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 IGSF23A1L1A6 192 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 TMEM235A6NFC5 223 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 OR11H12B2RN74 326 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 C9JCJ5 164 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 K7EM74 188 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 LST1O00453 97 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 PDE6DO43924 150 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 OR7C1O76099 320 aaPredicted RBP1.17□□□□□ -2.22
GPHN-216ENST00000557678 LY6HO94772 140 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 CNIH1O95406 144 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 NPYP01303 97 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 HLA-DRB1P01911 266 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 UCHL1P09936 223 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 FGF6P10767 208 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 PPP1R2P41236 205 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 GABRA2P47869 451 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 GZMMP51124 257 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 SNRPD2P62316 118 aaKnown RBP1.17□□□□□ -2.22
GPHN-216ENST00000557678 TNFAIP6P98066 277 aaPredicted RBP1.17□□□□□ -2.22
GPHN-216ENST00000557678 ZNF117Q03924 483 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 TEX36Q5VZQ5 186 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 TMEM42Q69YG0 159 aa1.17□□□□□ -2.22
GPHN-216ENST00000557678 NOXRED1Q6NXP6 359 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms