RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CASP6P55212 293 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 ZNF90Q03938 601 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 ZNF705AQ6ZN79 300 aaPredicted RBP9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 COQ2Q96H96 371 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 GMPPAQ96IJ6 420 aaPredicted RBP9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 PSG11Q9UQ72 335 aa9.85□□□□□ -0.83
VIPAS39-211ENST00000557658 SCO2A0A1W2PP80 73 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 GRIFINA4D1Z8 144 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 WISP2O76076 250 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 CELA3BP08861 270 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 SELEP16581 610 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 TRIP6Q15654 476 aaKnown RBP9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 TOMM20LQ6UXN7 152 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 OCC1Q8TAD7 63 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 OBP2BQ9NPH6 170 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 HCFC1P51610 2035 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 IGHV3-43A0A0B4J1X8 118 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 ZNF891A8MT65 544 aaPredicted RBP9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 WNT9BO14905 357 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 IGHV3-43DP0DP04 118 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 ZNF25P17030 456 aaPredicted RBP9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 HNF1AP20823 631 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 DCAF10Q5QP82 559 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 PRAMEF5Q5TYX0 476 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 PRAMEF6Q5VXH4 476 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 TREML4Q6UXN2 200 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 OR4A16Q8NH70 328 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 C20orf144Q9BQM9 153 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 PARD6AQ9NPB6 346 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 HEYLQ9NQ87 328 aaPredicted RBP9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 IL36BQ9NZH7 164 aa9.84□□□□□ -0.83
VIPAS39-211ENST00000557658 FAM90A9PA6NNJ1 464 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 ESDP10768 282 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 CRISP2P16562 243 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 SSTR5P35346 364 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 LINC00205P59089 165 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 RANP62826 216 aaKnown RBP9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 PSG7Q13046 419 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 AARDQ4LEZ3 155 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 LINC00696Q6ZRV3 163 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 PRR7Q8TB68 274 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 MGST2Q99735 147 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 ZPBPQ9BS86 351 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 GGTLC1Q9BX51 225 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 A0A1B0GWJ7 208 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 YPEL1O60688 119 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 TNFSF13O75888 250 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 RPLP1P05386 114 aaKnown RBP9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 CBLN1P23435 193 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 THBS3P49746 956 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 MIC13Q5XKP0 118 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 ACP7Q6ZNF0 438 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 TEX43Q6ZNM6 134 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 ZNF826PQ6ZT77 177 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 Q6ZWC4 215 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 CXorf67Q86X51 503 aaPredicted RBP9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 MAFAQ8NHW3 353 aaPredicted RBP9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 YPEL2Q96QA6 119 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 TMEM204Q9BSN7 226 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 PTPRBP23467 1997 aa9.83□□□□□ -0.84
VIPAS39-211ENST00000557658 A8MXE2 369 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 DEFB108AA8MXU0 73 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 SPINT2O43291 252 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 FCGR3BO75015 233 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 TNFSF15O95150 251 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 GPR12P47775 334 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 TGFBR3Q03167 851 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 FOXF2Q12947 444 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 TMEM183BQ1AE95 376 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 OR13A1Q8NGR1 328 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 RFESDQ8TAC1 157 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 MIEN1Q9BRT3 115 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 MS4A5Q9H3V2 200 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 TP53TG3Q9ULZ0 132 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 MT-CO2P00403 227 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 ADH4P08319 380 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 DUTP33316 252 aaKnown RBP9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 MEOX1P50221 254 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 TMPRSS3P57727 454 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 ZNF718Q3SXZ3 478 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 TPTE2P1Q5T6R2 138 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 TRAT1Q6PIZ9 186 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 Q6ZR03 302 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 OR52E5Q8NH55 327 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 HSPB9Q9BQS6 159 aa9.82□□□□□ -0.84
VIPAS39-211ENST00000557658 RRHO14718 337 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 SERF1AO75920 110 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 GCHFRP30047 84 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 VDAC2P45880 294 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 PEAR1Q5VY43 1037 aaPredicted RBP9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 BAGE3Q86Y29 109 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 BAGE2Q86Y30 109 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 C11orf53Q8IXP5 236 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 TPRX1Q8N7U7 411 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 OR5AU1Q8NGC0 362 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 UHRF2Q96PU4 802 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 IER2Q9BTL4 223 aa9.81□□□□□ -0.84
VIPAS39-211ENST00000557658 CXXC4Q9H2H0 198 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms