RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 A1L4Q6 167 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 BUB1B-PAK6H3BSN5 160 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 H7C2Y5 167 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 IAPPP10997 89 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 PAX1P15863 534 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 COX7A1P24310 79 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 REG1BP48304 166 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 ATP5J2P56134 94 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 SPCS3P61009 180 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 LMO4P61968 165 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 ARF6P62330 175 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 RELBQ01201 579 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 ZNF266Q14584 549 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 PDLIM3Q53GG5 364 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-233ENST00000557529 TMEM177Q53S58 311 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 OR4A47Q6IF82 309 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 ZNF429Q86V71 674 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 SLC7A5P1Q8MH63 180 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 ZNF295-AS1Q8N0V1 137 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 Q8N7P7 452 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 OR11H6Q8NGC7 330 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 LHX4Q969G2 390 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 CLCC1Q96S66 551 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 UNKLQ9H9P5 680 aaKnown RBP10.14□□□□□ -0.79
SHMT2-233ENST00000557529 WASHC3Q9Y3C0 194 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 KPTNQ9Y664 436 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 UBR5O95071 2799 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-233ENST00000557529 IGHV2-70DA0A0C4DH43 119 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 LINC00862A6NCI5 91 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 C15orf61A6NNL5 157 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 CEBPZOSA8MTT3 80 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 SHOXO15266 292 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 FOXH1O75593 365 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 SCAF4O95104 1147 aaKnown RBP10.14□□□□□ -0.79
SHMT2-233ENST00000557529 IFNA17P01571 189 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 DSCR9P59020 149 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 CLEC2AQ6UVW9 174 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 CLEC9AQ6UXN8 241 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 VKORC1L1Q8N0U8 176 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 PNKDQ8N490 385 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 OR4P4Q8NGL7 312 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 OR4C13Q8NGP0 309 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 OR1S2Q8NGQ3 325 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 LRRC20Q8TCA0 184 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 DTD1Q8TEA8 209 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 C10orf105Q8TEF2 133 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 FLYWCH2Q96CP2 140 aaKnown RBP10.14□□□□□ -0.79
SHMT2-233ENST00000557529 BSCL2Q96G97 398 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-233ENST00000557529 HARBI1Q96MB7 349 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 QTRT1Q9BXR0 403 aaKnown RBP10.14□□□□□ -0.79
SHMT2-233ENST00000557529 ARV1Q9H2C2 271 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 NUP50Q9UKX7 468 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 PRNDQ9UKY0 176 aa10.14□□□□□ -0.79
SHMT2-233ENST00000557529 FOXA2Q9Y261 457 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-233ENST00000557529 DFFBO76075 338 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 CST7O76096 145 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 IGKV1-16P04430 117 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 IL6RP08887 468 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-233ENST00000557529 ZFP36P26651 326 aaKnown RBP10.13□□□□□ -0.79
SHMT2-233ENST00000557529 OR2B8PP59922 312 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 HBG1P69891 147 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 HBG2P69892 147 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 RPP30P78346 268 aaKnown RBP10.13□□□□□ -0.79
SHMT2-233ENST00000557529 PDZD9Q8IXQ8 264 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 STPG2Q8N412 459 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 OR5C1Q8NGR4 320 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 OR4A5Q8NH83 315 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 VSTM2AQ8TAG5 236 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 RPEQ96AT9 228 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 WFDC1Q9HC57 220 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 FKBP11Q9NYL4 201 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 BET1LQ9NYM9 111 aa10.13□□□□□ -0.79
SHMT2-233ENST00000557529 STRAPQ9Y3F4 350 aaKnown RBP10.13□□□□□ -0.79
SHMT2-233ENST00000557529 LEUTXA8MZ59 168 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 VWC2LB2RUY7 222 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 H3BP45 60 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 LY6LH3BQJ8 138 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 UPK2O00526 184 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 ARG1P05089 322 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 NMBP08949 121 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 HTR1DP28221 377 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 CEACAM3P40198 252 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 LGALS7P47929 136 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 DYNLT3P51808 116 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 LCN2P80188 198 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 PAX2Q02962 417 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 DIAPH2-AS1Q14236 149 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 CLINT1Q14677 625 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 SPANXN5Q5MJ07 72 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 TMEM14EPQ6UXP3 125 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 TMED6Q8WW62 240 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 TSNAXQ99598 290 aaKnown RBP10.12□□□□□ -0.79
SHMT2-233ENST00000557529 ATP5SQ99766 215 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 GINS3Q9BRX5 216 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 HIPK2Q9H2X6 1198 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 SIRT7Q9NRC8 400 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 TMEM14BQ9NUH8 114 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 ZNF257Q9Y2Q1 563 aa10.12□□□□□ -0.79
SHMT2-233ENST00000557529 POLR3KQ9Y2Y1 108 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-233ENST00000557529 INSIG2Q9Y5U4 225 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms