RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 GMPPBQ9Y5P6 360 aa4.49□□□□□ -1.69
VPS33B-207ENST00000557470 FRAS1Q86XX4 4008 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 IGHV4OR15-8A0A075B7B6 117 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 A0A087WW49 117 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 IGHV7-81A0A0B4J1V7 117 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 IGHV3-43A0A0B4J1X8 118 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 TRAV41A0A0B4J266 112 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 TCRBV3S1A0A5B6 114 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 CENPXA8MT69 81 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 C15orf65H3BRN8 121 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 SDCBPO00560 298 aaPredicted RBP4.48□□□□□ -1.69
VPS33B-207ENST00000557470 SLC31A2O15432 143 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 HSPA12AO43301 675 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 GLAP06280 429 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 SMIM18P0DKX4 95 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 IGHV3-43DP0DP04 118 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 S100PP25815 95 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 IL3RAP26951 378 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 DAPP51397 102 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 NKX2-5P52952 324 aaPredicted RBP4.48□□□□□ -1.69
VPS33B-207ENST00000557470 NANOS3P60323 173 aaKnown RBP4.48□□□□□ -1.69
VPS33B-207ENST00000557470 SPCS3P61009 180 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF85Q03923 595 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 MMDQ15546 238 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 PIGYQ3MUY2 71 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 TP53I3Q53FA7 332 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 TMEM244Q5VVB8 128 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 GGNBP1Q5YKI7 109 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 C12orf73Q69YU5 71 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 FAHD1Q6P587 224 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 FAM220AQ7Z4H9 259 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 SGPP2Q8IWX5 399 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 C8orf31Q8N9H6 132 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 OR4D10Q8NGI6 311 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 OR13C3Q8NGS6 347 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 OR2G2Q8NGZ5 317 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 CASTOR1Q8WTX7 329 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 UFD1Q92890 307 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 RETNQ9HD89 108 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 IFT46Q9NQC8 304 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 PARP11Q9NR21 331 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 WARS2Q9UGM6 360 aaKnown RBP4.48□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF221Q9UK13 617 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 GAB2Q9UQC2 676 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 TNCP24821 2201 aa4.48□□□□□ -1.69
VPS33B-207ENST00000557470 RBMY1BA6NDE4 496 aaKnown RBP4.47□□□□□ -1.69
VPS33B-207ENST00000557470 CXorf65A6NEN9 183 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 RBMY1EA6NEQ0 496 aaKnown RBP4.47□□□□□ -1.69
VPS33B-207ENST00000557470 DIRC3C9JPN6 131 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 SOX15O60248 233 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 NXPH3O95157 252 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 IGLV1-51P01701 117 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 HLA-DRB1P01911 266 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 APOA1P02647 267 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 IFNA6P05013 189 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 IFNA4P05014 189 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ISG15P05161 165 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 LGALS1P09382 135 aaKnown RBP4.47□□□□□ -1.69
VPS33B-207ENST00000557470 RBMY1DP0C7P1 496 aaKnown RBP4.47□□□□□ -1.69
VPS33B-207ENST00000557470 TRAPPC2P0DI81 140 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 TRAPPC2BP0DI82 140 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ARSBP15848 533 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 CNTFRP26992 372 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 BLVRBP30043 206 aaPredicted RBP4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ALDH3B2P48448 385 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 KCNJ3P48549 501 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 PPT1P50897 306 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF137PP52743 207 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 PITPNAQ00169 270 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 NDPQ00604 133 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 KISS1Q15726 138 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ECSCRQ19T08 205 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 YIF1BQ5BJH7 314 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF691Q5VV52 312 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 LPCAT4Q643R3 524 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 SLC25A48Q6ZT89 311 aaKnown RBP4.47□□□□□ -1.69
VPS33B-207ENST00000557470 SUMF2Q8NBJ7 301 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ZNF439Q8NDP4 499 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 OR5H6Q8NGV6 325 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 OR10K1Q8NGX5 313 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 PYDC1Q8WXC3 89 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ARL11Q969Q4 196 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 RITA1Q96K30 269 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 OR4C12Q96R67 309 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 C12orf57Q99622 126 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 TCEAL7Q9BRU2 100 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ANKRD60Q9BZ19 345 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 TREM1Q9NP99 234 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 STUB1Q9UNE7 303 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 MRPS28Q9Y2Q9 187 aaKnown RBP4.47□□□□□ -1.69
VPS33B-207ENST00000557470 ALMS1Q8TCU4 4167 aa4.47□□□□□ -1.69
VPS33B-207ENST00000557470 TMEM30CPA0ZSE6 113 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 RAB19A4D1S5 217 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 OR4C45A6NMZ5 311 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 C12orf77C9JDV5 145 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 PRSS46E5RG02 174 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 RGS11O94810 467 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 IGHV3-11P01762 117 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 S100A8P05109 93 aa4.46□□□□□ -1.7
VPS33B-207ENST00000557470 FABP1P07148 127 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms