RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 SCOCQ9UIL1 159 aa12.79□□□□□ -0.36
VSX1-207ENST00000557285 MRPS7Q9Y2R9 242 aaKnown RBP12.79□□□□□ -0.36
VSX1-207ENST00000557285 TNCP24821 2201 aa12.78□□□□□ -0.36
VSX1-207ENST00000557285 SAP30O75446 220 aa12.78□□□□□ -0.36
VSX1-207ENST00000557285 SLC22A5O76082 557 aa12.78□□□□□ -0.36
VSX1-207ENST00000557285 VBP1P61758 197 aa12.78□□□□□ -0.36
VSX1-207ENST00000557285 MRGPRG-AS1Q2M3A8 158 aa12.78□□□□□ -0.36
VSX1-207ENST00000557285 TMEM69Q5SWH9 247 aa12.78□□□□□ -0.36
VSX1-207ENST00000557285 ZNF430Q9H8G1 570 aaPredicted RBP12.78□□□□□ -0.36
VSX1-207ENST00000557285 CCL28Q9NRJ3 127 aa12.78□□□□□ -0.36
VSX1-207ENST00000557285 ZMAT5Q9UDW3 170 aaKnown RBP12.78□□□□□ -0.36
VSX1-207ENST00000557285 XRCC3O43542 346 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 RAMP3O60896 148 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 ACTL6BO94805 426 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 HSPB1P04792 205 aaKnown RBP12.77□□□□□ -0.37
VSX1-207ENST00000557285 TAS2R20P59543 309 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 CD69Q07108 199 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 C10orf55Q5SWW7 151 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 TMEM17Q86X19 198 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 OR4S2Q8NH73 311 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 SRSF12Q8WXF0 261 aaKnown RBP12.77□□□□□ -0.37
VSX1-207ENST00000557285 SNAPC3Q92966 411 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 RHOVQ96L33 236 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 HSD17B10Q99714 261 aaKnown RBP12.77□□□□□ -0.37
VSX1-207ENST00000557285 SLC5A7Q9GZV3 580 aa12.77□□□□□ -0.37
VSX1-207ENST00000557285 PPYP01298 95 aa12.76□□□□□ -0.37
VSX1-207ENST00000557285 CBX5P45973 191 aa12.76□□□□□ -0.37
VSX1-207ENST00000557285 CDK10Q15131 360 aa12.76□□□□□ -0.37
VSX1-207ENST00000557285 SSX9Q7RTT3 188 aa12.76□□□□□ -0.37
VSX1-207ENST00000557285 MFSD4AQ8N468 514 aa12.76□□□□□ -0.37
VSX1-207ENST00000557285 SLC25A46Q96AG3 418 aa12.76□□□□□ -0.37
VSX1-207ENST00000557285 EHFQ9NZC4 300 aa12.76□□□□□ -0.37
VSX1-207ENST00000557285 COMMD3Q9UBI1 195 aa12.76□□□□□ -0.37
VSX1-207ENST00000557285 H3BUA1 57 aa12.75□□□□□ -0.37
VSX1-207ENST00000557285 TMEM127O75204 238 aa12.75□□□□□ -0.37
VSX1-207ENST00000557285 PRH1P02810 166 aa12.75□□□□□ -0.37
VSX1-207ENST00000557285 EIF4EP06730 217 aaKnown RBP12.75□□□□□ -0.37
VSX1-207ENST00000557285 HERV-K104P61576 105 aa12.75□□□□□ -0.37
VSX1-207ENST00000557285 EIF4EBP1Q13541 118 aaPredicted RBP12.75□□□□□ -0.37
VSX1-207ENST00000557285 C11orf87Q6NUJ2 197 aa12.75□□□□□ -0.37
VSX1-207ENST00000557285 OVCH2Q7RTZ1 564 aa12.75□□□□□ -0.37
VSX1-207ENST00000557285 OR5AP2Q8NGF4 316 aa12.75□□□□□ -0.37
VSX1-207ENST00000557285 TINAGL1Q9GZM7 467 aaPredicted RBP12.75□□□□□ -0.37
VSX1-207ENST00000557285 ZNF256Q9Y2P7 627 aaPredicted RBP12.75□□□□□ -0.37
VSX1-207ENST00000557285 A0A0G2JLM5 398 aa12.74□□□□□ -0.37
VSX1-207ENST00000557285 SULT1C2O00338 296 aa12.74□□□□□ -0.37
VSX1-207ENST00000557285 CREBL2O60519 120 aaPredicted RBP12.74□□□□□ -0.37
VSX1-207ENST00000557285 PMP2P02689 132 aa12.74□□□□□ -0.37
VSX1-207ENST00000557285 OR9G9P0C7N8 305 aa12.74□□□□□ -0.37
VSX1-207ENST00000557285 ZNF66Q6ZN08 573 aa12.74□□□□□ -0.37
VSX1-207ENST00000557285 HAPLN4Q86UW8 402 aa12.74□□□□□ -0.37
VSX1-207ENST00000557285 MMD2Q8IY49 270 aa12.74□□□□□ -0.37
VSX1-207ENST00000557285 ADAD2Q8NCV1 583 aaKnown RBP12.74□□□□□ -0.37
VSX1-207ENST00000557285 TMEM68Q96MH6 324 aa12.74□□□□□ -0.37
VSX1-207ENST00000557285 RSRP1Q9BUV0 290 aa12.74□□□□□ -0.37
VSX1-207ENST00000557285 DNAH9Q9NYC9 4486 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 HMX3A6NHT5 357 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 TRIM64CA6NLI5 447 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 KBTBD11O94819 623 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 OR2A4O95047 310 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 SMIM18P0DKX4 95 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 RFX2P48378 723 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 BRWD1-AS2P59051 145 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 ZNF429Q86V71 674 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 OR51H1Q8NH63 302 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 FYTTD1Q96QD9 318 aaKnown RBP12.73□□□□□ -0.37
VSX1-207ENST00000557285 OR2A7Q96R45 310 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 NAA50Q9GZZ1 169 aaKnown RBP12.73□□□□□ -0.37
VSX1-207ENST00000557285 COL7A1Q02388 2944 aa12.73□□□□□ -0.37
VSX1-207ENST00000557285 SORL1Q92673 2214 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 RBMXL2O75526 392 aaKnown RBP12.72□□□□□ -0.37
VSX1-207ENST00000557285 TRBV12-3P01733 135 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 PRSS3P35030 304 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 INSL3P51460 131 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 DCTN2Q13561 401 aaKnown RBP12.72□□□□□ -0.37
VSX1-207ENST00000557285 DYRK1AQ13627 763 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 ACSM6Q6P461 480 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 ZNF818PQ6ZRF7 136 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 C19orf35Q6ZS72 473 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 SNX29P2Q8IUI4 249 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 SPAG16Q8N0X2 631 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 OR5H2Q8NGV7 314 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 SPIN2AQ99865 258 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 B9D2Q9BPU9 175 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 SPIN2BQ9BPZ2 258 aa12.72□□□□□ -0.37
VSX1-207ENST00000557285 ZNF2Q9BSG1 426 aaPredicted RBP12.72□□□□□ -0.37
VSX1-207ENST00000557285 RANGRFQ9HD47 186 aaPredicted RBP12.72□□□□□ -0.37
VSX1-207ENST00000557285 HPGDSO60760 199 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 HRASP01112 189 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 MYOD1P15172 320 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 RPA2P15927 270 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 SPNP16150 400 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 HLA-DMAP28067 261 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 KIR2DS2P43631 304 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 RPL27AP46776 148 aaKnown RBP12.71□□□□□ -0.37
VSX1-207ENST00000557285 RHOGP84095 191 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 RNASE12Q5GAN4 147 aaKnown RBP12.71□□□□□ -0.37
VSX1-207ENST00000557285 AADACL3Q5VUY0 350 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 VSTM2AQ8TAG5 236 aa12.71□□□□□ -0.37
VSX1-207ENST00000557285 GIMAP1Q8WWP7 306 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms