RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 PTTG1O95997 202 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 HPRT1P00492 218 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 AMY1AP04745 511 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 SERPINE2P07093 398 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 UCP1P25874 307 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 C5orf56Q8N8D9 126 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 Q8N9W7 124 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 OR8H1Q8NGG4 311 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 OSR1Q8TAX0 266 aaPredicted RBP13.85□□□□□ -0.19
TUBB3-211ENST00000556536 GLYATL2Q8WU03 294 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 TAF15Q92804 592 aaKnown RBP eCLIP13.85□□□□□ -0.19
TUBB3-211ENST00000556536 GALNT14Q96FL9 552 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 TSNAXQ99598 290 aaKnown RBP13.85□□□□□ -0.19
TUBB3-211ENST00000556536 TMEM222Q9H0R3 208 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 PLEKHA2Q9HB19 425 aa13.85□□□□□ -0.19
TUBB3-211ENST00000556536 FAM212BQ9NTI7 297 aaPredicted RBP13.85□□□□□ -0.19
TUBB3-211ENST00000556536 HAX1O00165 279 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 RRHO14718 337 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 SLC25A17O43808 307 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 NDUFA3O95167 84 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 OR4E1P0C645 316 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 RPA2P15927 270 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 VAMP1P23763 118 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 LGALS7P47929 136 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 TMEM187Q14656 261 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 C16orf82Q7Z2V1 217 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 FAM71E2Q8N5Q1 922 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 LHFPL5Q8TAF8 219 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 FBXL15Q9H469 300 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 TPSG1Q9NRR2 321 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 KCNIP3Q9Y2W7 256 aa13.84□□□□□ -0.19
TUBB3-211ENST00000556536 C9orf170A2RU37 121 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 B3GALNT1O75752 331 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 SFT2D2O95562 160 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 CRYGBP07316 175 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 SAA1P0DJI8 122 aaPredicted RBP13.83□□□□□ -0.2
TUBB3-211ENST00000556536 MECP2P51608 486 aaKnown RBP13.83□□□□□ -0.2
TUBB3-211ENST00000556536 UBE2MP61081 183 aaKnown RBP13.83□□□□□ -0.2
TUBB3-211ENST00000556536 UBE2KP61086 200 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 BLCAPP62952 87 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 C5orf64Q2M2E5 130 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 RGS21Q2M5E4 152 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 TRIM16LQ309B1 348 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 C11orf88Q6PI97 169 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 PLET1Q6UQ28 207 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 SSX9Q7RTT3 188 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 R3HDM4Q96D70 268 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 ALX4Q9H161 411 aaPredicted RBP13.83□□□□□ -0.2
TUBB3-211ENST00000556536 RAB18Q9NP72 206 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 C1RLQ9NZP8 487 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 COMMD9Q9P000 198 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 KIAA1456Q9P272 454 aa13.83□□□□□ -0.2
TUBB3-211ENST00000556536 METTL1Q9UBP6 276 aaKnown RBP13.83□□□□□ -0.2
TUBB3-211ENST00000556536 TRIM77I1YAP6 450 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 FGF16O43320 207 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 SPDEFO95238 335 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 CDS2O95674 445 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 HRASP01112 189 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 KRASP01116 189 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 NQO2P16083 231 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 G6PCP35575 357 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 DHRS2Q13268 280 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 ANKRD55Q3KP44 614 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 C4orf46Q504U0 113 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 Q6ZS46 218 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 SELENOHQ8IZQ5 122 aaKnown RBP13.82□□□□□ -0.2
TUBB3-211ENST00000556536 OR52B4Q8NGK2 314 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 CASTOR1Q8WTX7 329 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 RHOVQ96L33 236 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 SEC22CQ9BRL7 303 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 MARVELD1Q9BSK0 173 aa13.82□□□□□ -0.2
TUBB3-211ENST00000556536 INMT-MINDY4F8WBC2 141 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 FCN1O00602 326 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 IGKV1-5P01602 117 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 HLA-AP01891 365 aaKnown RBP13.81□□□□□ -0.2
TUBB3-211ENST00000556536 ANXA3P12429 323 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 PJVKQ0ZLH3 352 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 POU2AF1Q16633 256 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 MRGPRG-AS1Q2M3A8 158 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 KRTAP24-1Q3LI83 254 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 VMA21Q3ZAQ7 101 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 OR4A47Q6IF82 309 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 LYG2Q86SG7 212 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 PUSL1Q8N0Z8 303 aaKnown RBP13.81□□□□□ -0.2
TUBB3-211ENST00000556536 SEC22AQ96IW7 307 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 TMEM56Q96MV1 263 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 CLCC1Q96S66 551 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 RASL11BQ9BPW5 248 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 SIGLEC9Q9Y336 463 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 TMEM56-RWDD3S4R434 201 aa13.81□□□□□ -0.2
TUBB3-211ENST00000556536 MARCH11A6NNE9 402 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 M0QZK8 103 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 RELBQ01201 579 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 PLGLAQ15195 96 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 TMEM268Q5VZI3 342 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 LIN54Q6MZP7 749 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 TEX45Q8NA69 505 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 DMBX1Q8NFW5 382 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 ZFAND2BQ8WV99 257 aa13.8□□□□□ -0.2
TUBB3-211ENST00000556536 NPFFR1Q9GZQ6 430 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms