RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TMEM204Q9BSN7 226 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 PARD6AQ9NPB6 346 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 DNAJC13O75165 2243 aa13.45□□□□□ -0.26
TUBB3-209ENST00000555609 IGHV3-64DA0A0J9YX35 117 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 SRRM5B3KS81 715 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 F2RL2O00254 374 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 HMGB3O15347 200 aaKnown RBP13.44□□□□□ -0.26
TUBB3-209ENST00000555609 PMP22Q01453 160 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 P2RY6Q15077 328 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 MORN2Q502X0 79 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 GCNT2Q8N0V5 402 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 CD177Q8N6Q3 437 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 CNEP1R1Q8N9A8 125 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 LRRC29Q8WV35 223 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 TRBV23-1A0A0A0MS06 115 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 TRGV8A0A0C4DH27 118 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 XKRY2A2RUG3 117 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 OR9G9P0C7N8 305 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 PAX1P15863 534 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 VDAC2P45880 294 aaPredicted RBP13.44□□□□□ -0.26
TUBB3-209ENST00000555609 FOXL1Q12952 345 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 PRAMEF5Q5TYX0 476 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 REC114Q7Z4M0 266 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 GATAD1Q8WUU5 269 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 S100PBPQ96BU1 408 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 PCGF1Q9BSM1 259 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 METRNQ9UJH8 293 aa13.44□□□□□ -0.26
TUBB3-209ENST00000555609 IGHV2OR16-5A0A0B4J2B6 119 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 AHRRA9YTQ3 701 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 GFRA3O60609 400 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 AGFG2O95081 481 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 CCKARP32238 428 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 RAB7AP51149 207 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 GAMTQ14353 236 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 C9orf152Q5JTZ5 239 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.43□□□□□ -0.26
TUBB3-209ENST00000555609 UFSP2Q9NUQ7 469 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 CEP250Q9BV73 2442 aa13.43□□□□□ -0.26
TUBB3-209ENST00000555609 IGHV3-43A0A0B4J1X8 118 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 TRAV17A0A0B4J275 112 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 MKRN2OSH3BPM6 223 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 FCGR3BO75015 233 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 CXorf1O96002 111 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 AMBPP02760 352 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 IGHV3-43DP0DP04 118 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 GPX4P36969 197 aaPredicted RBP13.42□□□□□ -0.26
TUBB3-209ENST00000555609 FABP6P51161 128 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 TLE1Q04724 770 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 FAM53AQ6NSI3 398 aaPredicted RBP13.42□□□□□ -0.26
TUBB3-209ENST00000555609 TMPRSS7Q7RTY8 843 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 LINC01551Q86U37 167 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 NECAP1Q8NC96 275 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 GNG12Q9UBI6 72 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 A0A1W2PPQ1 181 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 FNDC10F2Z333 226 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 STAG3L2P0CL84 134 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 STAG3L3P0CL85 134 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 NPPCP23582 126 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 ATP1A1-AS1Q5TC04 95 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 CDPF1Q6NVV7 123 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 C9orf106Q8NAJ2 232 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 RFESDQ8TAC1 157 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 NOL4LQ96MY1 436 aaPredicted RBP13.42□□□□□ -0.26
TUBB3-209ENST00000555609 S1PR3Q99500 378 aa13.42□□□□□ -0.26
TUBB3-209ENST00000555609 HEYLQ9NQ87 328 aaPredicted RBP13.42□□□□□ -0.26
TUBB3-209ENST00000555609 TRAV9-1A0A075B6T8 112 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 IGHV1-18A0A0C4DH31 117 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 PRSS46E5RG02 174 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 GNB1P62873 340 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 RELBQ01201 579 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 HNF4GQ14541 408 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 C3orf36Q3SXR2 165 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 LBHQ53QV2 105 aaPredicted RBP13.41□□□□□ -0.26
TUBB3-209ENST00000555609 TREML4Q6UXN2 200 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 TMEM18Q96B42 140 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 FAM122AQ96E09 287 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 MSL2Q9HCI7 577 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 NPVFQ9HCQ7 196 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 MED13Q9UHV7 2174 aa13.41□□□□□ -0.26
TUBB3-209ENST00000555609 DEFB108AA8MXU0 73 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 M0R1X1 148 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 PROP1O75360 226 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 DDTP30046 118 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 VWA1Q6PCB0 445 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 TMEM144Q7Z5S9 345 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 GCSAMQ8N6F7 178 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 OR4S2Q8NH73 311 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 ADTRPQ96IZ2 230 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 ZNF71Q9NQZ8 489 aaPredicted RBP13.4□□□□□ -0.26
TUBB3-209ENST00000555609 PROCRQ9UNN8 238 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 CHD3Q12873 2000 aaKnown RBP13.4□□□□□ -0.26
TUBB3-209ENST00000555609 MT-CO2P00403 227 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 RAB31Q13636 194 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 RTP5Q14D33 572 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 TMEM30BQ3MIR4 351 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 CST9LP1Q5W188 147 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 BHLHA15Q7RTS1 189 aaPredicted RBP13.4□□□□□ -0.26
TUBB3-209ENST00000555609 TPRX1Q8N7U7 411 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 CORO2AQ92828 525 aa13.4□□□□□ -0.26
TUBB3-209ENST00000555609 C14orf144Q96I85 54 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms