RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 RSRP1Q9BUV0 290 aa18.82■□□□□ 0.6
PRKCH-216ENST00000555542 TINAGL1Q9GZM7 467 aaPredicted RBP18.82■□□□□ 0.6
PRKCH-216ENST00000555542 FCER2P06734 321 aa18.81■□□□□ 0.6
PRKCH-216ENST00000555542 NHLRC4P0CG21 123 aaPredicted RBP18.81■□□□□ 0.6
PRKCH-216ENST00000555542 SPNP16150 400 aa18.81■□□□□ 0.6
PRKCH-216ENST00000555542 RPL30P62888 115 aaKnown RBP18.81■□□□□ 0.6
PRKCH-216ENST00000555542 GVQW1Q8N7I0 195 aa18.81■□□□□ 0.6
PRKCH-216ENST00000555542 OR4S2Q8NH73 311 aa18.81■□□□□ 0.6
PRKCH-216ENST00000555542 ZNF430Q9H8G1 570 aaPredicted RBP18.81■□□□□ 0.6
PRKCH-216ENST00000555542 TAS2R8Q9NYW2 309 aa18.81■□□□□ 0.6
PRKCH-216ENST00000555542 SMAD5-AS1Q9Y6J3 95 aa18.81■□□□□ 0.6
PRKCH-216ENST00000555542 AIREO43918 545 aa18.8■□□□□ 0.6
PRKCH-216ENST00000555542 OR9G9P0C7N8 305 aa18.8■□□□□ 0.6
PRKCH-216ENST00000555542 MRGPRG-AS1Q2M3A8 158 aa18.8■□□□□ 0.6
PRKCH-216ENST00000555542 OVCH2Q7RTZ1 564 aa18.8■□□□□ 0.6
PRKCH-216ENST00000555542 CROCCP3Q8IVE0 287 aa18.8■□□□□ 0.6
PRKCH-216ENST00000555542 MMD2Q8IY49 270 aa18.8■□□□□ 0.6
PRKCH-216ENST00000555542 SECTM1Q8WVN6 248 aa18.8■□□□□ 0.6
PRKCH-216ENST00000555542 TMEM127O75204 238 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 IGLV2-14P01704 120 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 PTHLHP12272 177 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 FCGR2CP31995 323 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 HOGA1Q86XE5 327 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 VKORC1L1Q8N0U8 176 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 TSPAN14Q8NG11 270 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 USMG5Q96IX5 58 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 SPIN2AQ99865 258 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 ASCL2Q99929 193 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 SPIN2BQ9BPZ2 258 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 AUNIPQ9H7T9 357 aa18.79■□□□□ 0.6
PRKCH-216ENST00000555542 A0A087WXM4 84 aa18.78■□□□□ 0.6
PRKCH-216ENST00000555542 BRI3O95415 125 aa18.78■□□□□ 0.6
PRKCH-216ENST00000555542 GP9P14770 177 aa18.78■□□□□ 0.6
PRKCH-216ENST00000555542 TGFBR1P36897 503 aa18.78■□□□□ 0.6
PRKCH-216ENST00000555542 LSM3P62310 102 aaKnown RBP18.78■□□□□ 0.6
PRKCH-216ENST00000555542 ZNF66Q6ZN08 573 aa18.78■□□□□ 0.6
PRKCH-216ENST00000555542 ANKRD13BQ86YJ7 626 aa18.78■□□□□ 0.6
PRKCH-216ENST00000555542 MFSD4AQ8N468 514 aa18.78■□□□□ 0.6
PRKCH-216ENST00000555542 ADAD2Q8NCV1 583 aaKnown RBP18.78■□□□□ 0.6
PRKCH-216ENST00000555542 OR13F1Q8NGS4 319 aa18.78■□□□□ 0.6
PRKCH-216ENST00000555542 VSTM2AQ8TAG5 236 aa18.78■□□□□ 0.6
PRKCH-216ENST00000555542 PEF1Q9UBV8 284 aaKnown RBP18.78■□□□□ 0.6
PRKCH-216ENST00000555542 TNFSF12O43508 249 aa18.77■□□□□ 0.6
PRKCH-216ENST00000555542 TNFAIP8O95379 198 aa18.77■□□□□ 0.6
PRKCH-216ENST00000555542 CBX5P45973 191 aa18.77■□□□□ 0.6
PRKCH-216ENST00000555542 HAPLN4Q86UW8 402 aa18.77■□□□□ 0.6
PRKCH-216ENST00000555542 S100A16Q96FQ6 103 aaKnown RBP18.77■□□□□ 0.6
PRKCH-216ENST00000555542 WWC2-AS2Q96NR7 200 aa18.77■□□□□ 0.6
PRKCH-216ENST00000555542 IFT46Q9NQC8 304 aa18.77■□□□□ 0.6
PRKCH-216ENST00000555542 CCL28Q9NRJ3 127 aa18.77■□□□□ 0.6
PRKCH-216ENST00000555542 U3KQK5 164 aa18.77■□□□□ 0.6
PRKCH-216ENST00000555542 SORL1Q92673 2214 aa18.76■□□□□ 0.59
PRKCH-216ENST00000555542 MEIS3P1A6NDR6 274 aa18.76■□□□□ 0.59
PRKCH-216ENST00000555542 OR2A4O95047 310 aa18.76■□□□□ 0.59
PRKCH-216ENST00000555542 FXYD4P59646 89 aa18.76■□□□□ 0.59
PRKCH-216ENST00000555542 DYRK1AQ13627 763 aa18.76■□□□□ 0.59
PRKCH-216ENST00000555542 C10orf55Q5SWW7 151 aa18.76■□□□□ 0.59
PRKCH-216ENST00000555542 OR2A7Q96R45 310 aa18.76■□□□□ 0.59
PRKCH-216ENST00000555542 GPHA2Q96T91 129 aa18.76■□□□□ 0.59
PRKCH-216ENST00000555542 KBTBD11O94819 623 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 PPYP01298 95 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 PRH1P02810 166 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 KIR2DS2P43631 304 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 SYNJ2BPP57105 145 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 RHOGP84095 191 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 TATDN3Q17R31 274 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 RPEL1Q2QD12 228 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 UBE2NLQ5JXB2 153 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 ZNF343Q6P1L6 599 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 YIPF6Q96EC8 236 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 SLC5A7Q9GZV3 580 aa18.75■□□□□ 0.59
PRKCH-216ENST00000555542 DPPA5A6NC42 116 aa18.74■□□□□ 0.59
PRKCH-216ENST00000555542 FAM223BA6NKX1 122 aa18.74■□□□□ 0.59
PRKCH-216ENST00000555542 XRCC3O43542 346 aa18.74■□□□□ 0.59
PRKCH-216ENST00000555542 HRASP01112 189 aa18.74■□□□□ 0.59
PRKCH-216ENST00000555542 RPS19P39019 145 aaKnown RBP18.74■□□□□ 0.59
PRKCH-216ENST00000555542 EIF4EBP1Q13541 118 aaPredicted RBP18.74■□□□□ 0.59
PRKCH-216ENST00000555542 SSX9Q7RTT3 188 aa18.74■□□□□ 0.59
PRKCH-216ENST00000555542 SLC25A42Q86VD7 318 aa18.74■□□□□ 0.59
PRKCH-216ENST00000555542 FAM223AQ8IWN6 122 aa18.74■□□□□ 0.59
PRKCH-216ENST00000555542 SAMD12Q8N8I0 201 aa18.74■□□□□ 0.59
PRKCH-216ENST00000555542 OR9G4Q8NGQ1 327 aa18.74■□□□□ 0.59
PRKCH-216ENST00000555542 FYTTD1Q96QD9 318 aaKnown RBP18.74■□□□□ 0.59
PRKCH-216ENST00000555542 COL7A1Q02388 2944 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 TRBV12-3P01733 135 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 ATP5G2Q06055 141 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 CATR1Q13166 79 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 EXOSC2Q13868 293 aaKnown RBP18.73■□□□□ 0.59
PRKCH-216ENST00000555542 KLF5Q13887 457 aaPredicted RBP18.73■□□□□ 0.59
PRKCH-216ENST00000555542 TMEM69Q5SWH9 247 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 TMEM17Q86X19 198 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 ZBTB34Q8NCN2 500 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 OR5AP2Q8NGF4 316 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 SNAPC3Q92966 411 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 AKIP1Q9NQ31 210 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 TNCP24821 2201 aa18.73■□□□□ 0.59
PRKCH-216ENST00000555542 HMX3A6NHT5 357 aa18.72■□□□□ 0.59
PRKCH-216ENST00000555542 RPL27AP46776 148 aaKnown RBP18.72■□□□□ 0.59
PRKCH-216ENST00000555542 HERV-K104P61576 105 aa18.72■□□□□ 0.59
PRKCH-216ENST00000555542 MSMO1Q15800 293 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms