RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ZNF818PQ6ZRF7 136 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 H1FOOQ8IZA3 346 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-213ENST00000555386 SELENOHQ8IZQ5 122 aaKnown RBP8.05□□□□□ -1.12
PSEN1-213ENST00000555386 PRR18Q8N4B5 295 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-213ENST00000555386 DMBX1Q8NFW5 382 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 OR52M1Q8NGK5 317 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 OR13A1Q8NGR1 328 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 OR10J5Q8NHC4 309 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 RFESDQ8TAC1 157 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 SECTM1Q8WVN6 248 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 TSNAXQ99598 290 aaKnown RBP8.05□□□□□ -1.12
PSEN1-213ENST00000555386 SEC11CQ9BY50 192 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 SLC25A31Q9H0C2 315 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 C11orf1Q9H5F2 150 aa8.05□□□□□ -1.12
PSEN1-213ENST00000555386 CENPVL3A0A0U1RRI6 287 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 hCG_1809904A0A1W2PP81 198 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 A0A1W2PPE2 198 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 A0A1W2PR64 198 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 A0A1W2PRV1 198 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 TMEM30CPA0ZSE6 113 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 M0R1W7 72 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 MED6O75586 246 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 MMP23AO75900 390 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 IGHV3-7P01780 117 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 SPP1P10451 314 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 HOXB4P17483 251 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-213ENST00000555386 NKX2-1P43699 371 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-213ENST00000555386 C5orf24Q7Z6I8 188 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 KIR3DL3Q8N743 410 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 AKR1E2Q96JD6 320 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 UQCC1Q9NVA1 299 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 TRAPPC2LQ9UL33 140 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 RCL1Q9Y2P8 373 aaKnown RBP8.04□□□□□ -1.12
PSEN1-213ENST00000555386 STRAPQ9Y3F4 350 aaKnown RBP8.04□□□□□ -1.12
PSEN1-213ENST00000555386 LINC00312Q9Y6C7 94 aa8.04□□□□□ -1.12
PSEN1-213ENST00000555386 IGKV1D-13A0A0B4J2D9 117 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 IGHV1-69DA0A0B4J2H0 117 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 MDFIC2A0A1B0GVS7 189 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 RNASEK-C17orf49H0YIS7 233 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 DNASE2O00115 360 aaPredicted RBP8.03□□□□□ -1.12
PSEN1-213ENST00000555386 TSPAN4O14817 238 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 PGLYRP1O75594 196 aaPredicted RBP8.03□□□□□ -1.12
PSEN1-213ENST00000555386 SNAPINO95295 136 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 IGHV1-69P01742 117 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 IGKV1-13P0DP09 117 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 RCC1P18754 421 aaPredicted RBP8.03□□□□□ -1.12
PSEN1-213ENST00000555386 F2RP25116 425 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 PAX6P26367 422 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 SSTR5P35346 364 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 LPAR6P43657 344 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 DLX6P56179 175 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 BAXQ07812 192 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 ZNF266Q14584 549 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 NMSQ5H8A3 153 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 SLC35E4Q6ICL7 350 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 ZNF497Q6ZNH5 498 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 FAM219AQ8IW50 185 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 OR2C3Q8N628 320 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 TEX29Q8N6K0 151 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 LEAP2Q969E1 77 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 GAL3ST2Q9H3Q3 398 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 CCL28Q9NRJ3 127 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 TNFRSF19Q9NS68 423 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 OR6C3Q9NZP0 311 aa8.03□□□□□ -1.12
PSEN1-213ENST00000555386 IGHV3-43A0A0B4J1X8 118 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 A0A1B0GU03 582 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 F8W036 122 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 TRIM77I1YAP6 450 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 PITX3O75364 302 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 FBXO24O75426 580 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 FSHBP01225 129 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 CD5P06127 495 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 IGHV1-8P0DP01 117 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 IGHV3-43DP0DP04 118 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 PRTN3P24158 256 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 EWSR1Q01844 656 aaKnown RBP eCLIP8.02□□□□□ -1.13
PSEN1-213ENST00000555386 ID3Q02535 119 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 HMGN3Q15651 99 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 ATRAIDQ6UW56 229 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 SIGLECL1Q8N7X8 197 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 OR10V1Q8NGI7 309 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 DUX5Q96PT3 197 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 HRH4Q9H3N8 390 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 TREM1Q9NP99 234 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 LYRM2Q9NU23 88 aaPredicted RBP8.02□□□□□ -1.13
PSEN1-213ENST00000555386 MBNL3Q9NUK0 354 aaKnown RBP8.02□□□□□ -1.13
PSEN1-213ENST00000555386 CALYQ9NYX4 217 aa8.02□□□□□ -1.13
PSEN1-213ENST00000555386 KBTBD11-OT1A0A1B0GTJ5 212 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 C17orf98A8MV24 154 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 HSD17B6O14756 317 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 NPFFO15130 113 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 ARG1P05089 322 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 ADCYAP1P18509 176 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 VAMP2P63027 116 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 C17orf58Q2M2W7 97 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 DEFB112Q30KQ8 113 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 UTF1Q5T230 341 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 NCR3LG1Q68D85 454 aa8.01□□□□□ -1.13
PSEN1-213ENST00000555386 FAM53AQ6NSI3 398 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms