RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ABHD5Q8WTS1 349 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 PSG11Q9UQ72 335 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 FAM215AQ9Y5M1 114 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 SPINK4O60575 86 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 CD40P25942 277 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 GLIPR1P48060 266 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 COLCA1Q6ZS62 124 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 MYOZ1Q9NP98 299 aaPredicted RBP13.99□□□□□ -0.17
PCNX1-209ENST00000554879 A0A0G2JNJ9 132 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 ZNF735P0CB33 412 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 ZNF816Q0VGE8 651 aaPredicted RBP13.99□□□□□ -0.17
PCNX1-209ENST00000554879 LYZL2Q7Z4W2 148 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 TBC1D26Q86UD7 250 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 BORCS7Q96B45 105 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 RNF2Q99496 336 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 Q9UFV3 132 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 MGAQ8IWI9 3026 aa13.99□□□□□ -0.17
PCNX1-209ENST00000554879 C3orf85A0A1B0GTC6 90 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 GRIFINA4D1Z8 144 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 TOX4O94842 621 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 PRDX2P32119 198 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 TIMP3P35625 211 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 NKX2-1P43699 371 aaPredicted RBP13.98□□□□□ -0.17
PCNX1-209ENST00000554879 SRPXP78539 464 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 ACOT6Q3I5F7 207 aaPredicted RBP13.98□□□□□ -0.17
PCNX1-209ENST00000554879 UNQ5815/PRO19632Q6UWF5 114 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 BOD1Q96IK1 185 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 CYTL1Q9NRR1 136 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 LYRM2Q9NU23 88 aaPredicted RBP13.98□□□□□ -0.17
PCNX1-209ENST00000554879 SLC39A9Q9NUM3 307 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 EXPH5Q8NEV8 1989 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 SSSCA1O60232 199 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 HKR1P10072 659 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 RPL24P83731 157 aaKnown RBP13.98□□□□□ -0.17
PCNX1-209ENST00000554879 HTD2P86397 168 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 IL13RA2Q14627 380 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 FAM78BQ5VT40 261 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 A8MXE2 369 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 CEACAM4O75871 244 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 MGST1P10620 155 aaKnown RBP13.98□□□□□ -0.17
PCNX1-209ENST00000554879 GLRXP35754 106 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 GTF2H5Q6ZYL4 71 aa13.98□□□□□ -0.17
PCNX1-209ENST00000554879 FAM3BP58499 235 aaPredicted RBP13.97□□□□□ -0.17
PCNX1-209ENST00000554879 SAXO1Q8IYX7 474 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 OR4F5Q8NH21 305 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 OR4F4Q96R69 305 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 OR2D2Q9H210 308 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 WIPI2Q9Y4P8 454 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 C1QTNF9BB2RNN3 333 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 KRASP01116 189 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 C1QTNF9P0C862 333 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 GPR12P47775 334 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 RUNX1Q01196 453 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 BSPH1Q075Z2 132 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 ANKRD55Q3KP44 614 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 C10orf91Q5T1B1 145 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 C1QL4Q86Z23 238 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 FREM2Q5SZK8 3169 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 WIPF3A6NGB9 483 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 J3QW42 95 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 OR2T10Q8NGZ9 312 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 RNF7Q9UBF6 113 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 COL5A1P20908 1838 aaPredicted RBP13.97□□□□□ -0.17
PCNX1-209ENST00000554879 IQCF6A8MYZ5 107 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 MDH2P40926 338 aaKnown RBP13.97□□□□□ -0.17
PCNX1-209ENST00000554879 DKK4Q9UBT3 224 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 ZFP30Q9Y2G7 519 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 SLC25A15Q9Y619 301 aa13.97□□□□□ -0.17
PCNX1-209ENST00000554879 MPPED1O15442 326 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 MPZP25189 248 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 MOB1BQ7L9L4 216 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 OR1A1Q9P1Q5 309 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 NKX2-6A6NCS4 301 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 FBLL1A6NHQ2 334 aaKnown RBP13.96□□□□□ -0.17
PCNX1-209ENST00000554879 IFNL4K9M1U5 179 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 NCKAP5O14513 1909 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 CNN1P51911 297 aaKnown RBP13.96□□□□□ -0.17
PCNX1-209ENST00000554879 CCL20P78556 96 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 CCL13Q99616 98 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 Q9N2K0 584 aa13.96□□□□□ -0.17
PCNX1-209ENST00000554879 ERVK-16P61578 105 aa13.96□□□□□ -0.18
PCNX1-209ENST00000554879 C16orf82Q7Z2V1 217 aa13.96□□□□□ -0.18
PCNX1-209ENST00000554879 ZNRF1Q8ND25 227 aa13.96□□□□□ -0.18
PCNX1-209ENST00000554879 RCC1LQ96I51 464 aaKnown RBP13.96□□□□□ -0.18
PCNX1-209ENST00000554879 ABHD14AQ9BUJ0 271 aa13.96□□□□□ -0.18
PCNX1-209ENST00000554879 GNG7O60262 68 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 IGLV3-1P01715 115 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 PRRX1P54821 245 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 OR1L1Q8NH94 360 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 AQP10Q96PS8 301 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 IL36GQ9NZH8 169 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 MRGPRGQ86SM5 289 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 OR52L2PQ8NGH6 319 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 MAP1LC3B2A6NCE7 125 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 ADAM20O43506 726 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 GYPAP02724 150 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 AMTP48728 403 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 LHX4Q969G2 390 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 MAP1LC3BQ9GZQ8 125 aa13.95□□□□□ -0.18
PCNX1-209ENST00000554879 RAB9BQ9NP90 201 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms