RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, human

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01550-204	ENST00000554822	EXOSC2	Q13868	293 aa	Known RBP	4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	OR8G1	Q15617	311 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	ANKRD55	Q3KP44	614 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	SPATA46	Q5T0L3	261 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822		Q6P435	159 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	FIP1L1	Q6UN15	594 aa	Known RBP	4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	ACOT7L	Q6ZUV0	252 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	MOB1B	Q7L9L4	216 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	SSX8	Q7RTT4	187 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	WDR86	Q86TI4	376 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	SLC51B	Q86UW2	128 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	LRTM2	Q8N967	370 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	CCDC71L	Q8N9Z2	235 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	SUMF2	Q8NBJ7	301 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	OR4A4P	Q8NGN8	299 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	MRPL30	Q8TCC3	161 aa	Known RBP	4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	PPP1R1C	Q8WVI7	109 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	SEC22A	Q96IW7	307 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	C2orf50	Q96LR7	162 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	ARL6	Q9H0F7	186 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	WDR13	Q9H1Z4	485 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	CXXC4	Q9H2H0	198 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	OR51B6	Q9H340	312 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	LIME1	Q9H400	295 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	PRORY	Q9H606	182 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	NAA60	Q9H7X0	242 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	HES4	Q9HCC6	221 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	DNAJC4	Q9NNZ3	241 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	PURG	Q9UJV8	347 aa	Known RBP	4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	ZNF835	Q9Y2P0	537 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	MEMO1	Q9Y316	297 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	AUP1	Q9Y679	476 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	ESPL1	Q14674	2120 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	RYR3	Q15413	4870 aa		4.19	□□□□□ -1.74
LINC01550-204	ENST00000554822	BIRC6	Q9NR09	4857 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	PIGBOS1	A0A0B4J2F0	54 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	RNF222	A6NCQ9	220 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	FAM25E	A8MYX2	175 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	EEF1E1-BLOC1S5	C9J1V9	151 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	SH2D1B	O14796	132 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	DEGS1	O15121	323 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	MLNR	O43193	412 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	BCL2L11	O43521	198 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	ADAP1	O75689	374 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	RHBDL1	O75783	438 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	PTBP3	O95758	552 aa	Known RBP	4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	CFD	P00746	253 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	PPY	P01298	95 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	IFNA21	P01568	189 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	IGHV3-13	P01766	116 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	WNT2	P09544	360 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	PET100	P0DJ07	73 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	ZNF250	P15622	560 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	AADAC	P22760	399 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	CD200	P41217	278 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	KCNJ3	P48549	501 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	AP2S1	P53680	142 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	PIGP	P57054	158 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	BPIFB3	P59826	476 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	RAB14	P61106	215 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	HERV-K104	P61576	105 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	UBA52	P62987	128 aa	Known RBP	4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	SRPX	P78539	464 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	NAAA	Q02083	359 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	ZNF154	Q13106	437 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	TMEM187	Q14656	261 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	SLC9A3R2	Q15599	337 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	TSC22D1	Q15714	1073 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	ALKBH6	Q3KRA9	238 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	ABCA11P	Q4W5N1	156 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	PRSS54	Q6PEW0	395 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	ZNF497	Q6ZNH5	498 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	OR10Z1	Q8NGY1	313 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	NEK7	Q8TDX7	302 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	DYRK2	Q92630	601 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	TOMM40L	Q969M1	308 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	MUCL1	Q96DR8	90 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	PHYHIPL	Q96FC7	376 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	OR10C1	Q96KK4	312 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	ZNF488	Q96MN9	340 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	CABLES2	Q9BTV7	478 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	RNF126	Q9BV68	326 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	METTL8	Q9H825	291 aa	Known RBP	4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	GSN-AS1	Q9NRJ2	163 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	SLC2A9	Q9NRM0	540 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	MED9	Q9NWA0	146 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	RASL12	Q9NYN1	266 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	GLS2	Q9UI32	602 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	KIF25	Q9UIL4	384 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	TP53TG5	Q9Y2B4	290 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	WIPI2	Q9Y4P8	454 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	GTF3C1	Q12789	2109 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	CSMD2	Q7Z408	3487 aa		4.18	□□□□□ -1.74
LINC01550-204	ENST00000554822	IGLV3-9	A0A075B6K5	115 aa		4.17	□□□□□ -1.74
LINC01550-204	ENST00000554822	IGKV1-6	A0A0C4DH72	117 aa		4.17	□□□□□ -1.74
LINC01550-204	ENST00000554822	C3orf85	A0A1B0GTC6	90 aa		4.17	□□□□□ -1.74
LINC01550-204	ENST00000554822	DUXB	A0A1W2PPF3	345 aa		4.17	□□□□□ -1.74

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