RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 RPL39P5Q59GN2 51 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 CTRB2Q6GPI1 263 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 RBPMS2Q6ZRY4 209 aaKnown RBP3.54□□□□□ -1.84
ATXN3-229ENST00000554672 C5orf24Q7Z6I8 188 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 FAM223AQ8IWN6 122 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 TMEM61Q8N0U2 210 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 ACBD7Q8N6N7 88 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 UXS1Q8NBZ7 420 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 ADAD2Q8NCV1 583 aaKnown RBP3.54□□□□□ -1.84
ATXN3-229ENST00000554672 OR1L6Q8NGR2 347 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 OR5AK2Q8NH90 309 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 OSR1Q8TAX0 266 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-229ENST00000554672 TRUB1Q8WWH5 349 aaKnown RBP3.54□□□□□ -1.84
ATXN3-229ENST00000554672 FAM46BQ96A09 425 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 C4orf36Q96KX1 117 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 WDR12Q9GZL7 423 aaKnown RBP3.54□□□□□ -1.84
ATXN3-229ENST00000554672 TMEM138Q9NPI0 162 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 TAS2R4Q9NYW5 299 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 ABRACLQ9P1F3 81 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 FBXL17Q9UF56 701 aa3.54□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF230Q9UIE0 474 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-229ENST00000554672 EXOSC1Q9Y3B2 195 aaKnown RBP3.54□□□□□ -1.84
ATXN3-229ENST00000554672 TRBV9A0A0B4J1U6 114 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 A0A1W2PP11 408 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF320A2RRD8 509 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 H3BNX3 289 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 RTL8CO15255 209 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 CDK2AP2O75956 126 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 IGKV1-16P04430 117 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 CD2P06729 351 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 SCTP09683 121 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 FCGR1AP12314 374 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 EDN2P20800 178 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 BDKRB2P30411 391 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 SOX2P48431 317 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 GBX2P52951 348 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-229ENST00000554672 MFAP2P55001 183 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 PPP3R1P63098 170 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 DEFA5Q01523 94 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 PJVKQ0ZLH3 352 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 EXOSC2Q13868 293 aaKnown RBP3.53□□□□□ -1.84
ATXN3-229ENST00000554672 DDI2Q5TDH0 399 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 GLT8D1Q68CQ7 371 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 OR4A47Q6IF82 309 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 NR2C2APQ86WQ0 139 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 PDPNQ86YL7 162 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 SYS1Q8N2H4 156 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 NECAP1Q8NC96 275 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 KCNG3Q8TAE7 436 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 MRPL30Q8TCC3 161 aaKnown RBP3.53□□□□□ -1.84
ATXN3-229ENST00000554672 MARC2Q969Z3 335 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 CCDC124Q96CT7 223 aaKnown RBP3.53□□□□□ -1.84
ATXN3-229ENST00000554672 GALNT14Q96FL9 552 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 CENPNQ96H22 339 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-229ENST00000554672 ABHD14BQ96IU4 210 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 PHB2Q99623 299 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 RARRES2Q99969 163 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 PDCD1LG2Q9BQ51 273 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 AGMATQ9BSE5 352 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 GABARAPL3Q9BY60 117 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 C6orf62Q9GZU0 229 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-229ENST00000554672 CSTL1Q9H114 145 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 MAP6D1Q9H9H5 199 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 MLXQ9UH92 298 aa3.53□□□□□ -1.84
ATXN3-229ENST00000554672 EXOGQ9Y2C4 368 aaKnown RBP3.53□□□□□ -1.84
ATXN3-229ENST00000554672 DNAH2Q9P225 4427 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 IGKV2D-30A0A075B6S6 120 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 TMEM213A2RRL7 107 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 SNTNA6NMZ2 147 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 MPTX1A8MV57 137 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 PPP5D1E7EU14 171 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 E9PI62 339 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 G3V2T6 193 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 BAG2O95816 211 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 IGLV2-23P01705 113 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 HLA-AP01891 365 aaKnown RBP3.52□□□□□ -1.85
ATXN3-229ENST00000554672 APOA2P02652 100 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 PRH1P02810 166 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 ALPLP05186 524 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 C8orf88P0DMB2 117 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 APELAP0DMC3 54 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 RPL35AP18077 110 aaKnown RBP3.52□□□□□ -1.85
ATXN3-229ENST00000554672 CEACAM6P40199 344 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 TIRAPP58753 221 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 SNRPGP62308 76 aaKnown RBP3.52□□□□□ -1.85
ATXN3-229ENST00000554672 MED22Q15528 200 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 HMGN3Q15651 99 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 LGALS9BQ3B8N2 356 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 MEDAGQ5VYS4 303 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 LAMTOR1Q6IAA8 161 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 GLIPR1L1Q6UWM5 242 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 LHFPL3Q86UP9 236 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 SPATA24Q86W54 205 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 CDH26Q8IXH8 852 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 TTC9CQ8N5M4 171 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 POM121L12Q8N7R1 296 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 MAPKAPK5-AS1Q8N8E1 139 aa3.52□□□□□ -1.85
ATXN3-229ENST00000554672 DRAXINQ8NBI3 349 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms