RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ARHGAP5-AS1Q96IT6 56 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 URM1Q9BTM9 101 aaKnown RBP3.23□□□□□ -1.89
VTI1B-203ENST00000554636 PECRQ9BY49 303 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 PLGRKTQ9HBL7 147 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 CHMP1AQ9HD42 196 aaPredicted RBP3.23□□□□□ -1.89
VTI1B-203ENST00000554636 Q9N2K0 584 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 OR2S2Q9NQN1 319 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 PLEKHJ1Q9NW61 149 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 KCNIP1Q9NZI2 227 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF107Q9UII5 783 aaPredicted RBP3.23□□□□□ -1.89
VTI1B-203ENST00000554636 LINC00527Q9UJ94 153 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 BLOC1S6Q9UL45 172 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 HSF4Q9ULV5 492 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 KCNK7Q9Y2U2 307 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 V9GY05 133 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 SACSQ9NZJ4 4579 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 TNCP24821 2201 aa3.23□□□□□ -1.89
VTI1B-203ENST00000554636 DYNC2H1Q8NCM8 4307 aaKnown RBP3.23□□□□□ -1.89
VTI1B-203ENST00000554636 STARD9Q9P2P6 4700 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 IGHV7-81A0A0B4J1V7 117 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 SMIM30A4D0T7 59 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 CBY3A6NI87 242 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 IFITM5A6NNB3 132 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 NCBP2LA6PVI3 153 aaKnown RBP3.22□□□□□ -1.89
VTI1B-203ENST00000554636 H0YJW9 148 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 PDCD5O14737 125 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 ATP6V0E1O15342 81 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 DENRO43583 198 aaKnown RBP3.22□□□□□ -1.89
VTI1B-203ENST00000554636 NDUFA3O95167 84 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 HLA-DRB1P01911 266 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 IGF1P05019 195 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 FCGR3AP08637 254 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 CT45A6P0DMU7 189 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 CT45A5P0DMU8 189 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 CT45A7P0DMV0 189 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 IGLL1P15814 213 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 HIST1H1DP16402 221 aaKnown RBP3.22□□□□□ -1.89
VTI1B-203ENST00000554636 GALP22466 123 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 MYL9P24844 172 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 PSMB8P28062 276 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 MYCNOSP40205 109 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 VEGFCP49767 419 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 ACTBP60709 375 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 MMDQ15546 238 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 C5orf64Q2M2E5 130 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 C2orf76Q3KRA6 126 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 C22orf42Q6IC83 251 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF773Q6PK81 442 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 FAM131AQ6UXB0 335 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 COMMD1Q8N668 190 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 KLHL30-AS1Q8NEE0 82 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 NPBQ8NG41 125 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 OR2AK2Q8NG84 335 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 OR56B1Q8NGI3 324 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 MYOZ3Q8TDC0 251 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 TMEM170AQ8WVE7 144 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 IL1F10Q8WWZ1 152 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 PTX4Q96A99 478 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 ABHD14BQ96IU4 210 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 KCTD7Q96MP8 289 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 P2RX4Q99571 388 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 RASL11BQ9BPW5 248 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 ARPC5LQ9BPX5 153 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 CMSS1Q9BQ75 279 aaKnown RBP3.22□□□□□ -1.89
VTI1B-203ENST00000554636 AGMATQ9BSE5 352 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 CABLES2Q9BTV7 478 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 TOLLIPQ9H0E2 274 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 RIMS4Q9H426 269 aaPredicted RBP3.22□□□□□ -1.89
VTI1B-203ENST00000554636 C12orf4Q9NQ89 552 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 ZFP57Q9NU63 452 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 NECAP2Q9NVZ3 263 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 PIPOXQ9P0Z9 390 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 ABRACLQ9P1F3 81 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 PEMTQ9UBM1 199 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 RAB22AQ9UL26 194 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 STUB1Q9UNE7 303 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 LRRC42Q9Y546 428 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 RYR3Q15413 4870 aa3.22□□□□□ -1.89
VTI1B-203ENST00000554636 RYR2Q92736 4967 aa3.21□□□□□ -1.89
VTI1B-203ENST00000554636 PLECQ15149 4684 aaKnown RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 IGKV1D-8A0A087WSZ0 117 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 OR5H14A6NHG9 310 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 TRDCB7Z8K6 153 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 G3V318 75 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 K7EIL1 84 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 BMPR1BO00238 502 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 RAB29O14966 203 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 NBR2O15453 112 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 FABP7O15540 132 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 IGHG4P01861 327 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 CD3GP09693 182 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 SLC2A2P11168 524 aaPredicted RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 GNB3P16520 340 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 RAB3BP20337 219 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 VDAC1P21796 283 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 PSMB9P28065 219 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 SLC6A1P30531 599 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 FGF9P31371 208 aaPredicted RBP3.21□□□□□ -1.9
VTI1B-203ENST00000554636 SOX6P35712 828 aa3.21□□□□□ -1.9
VTI1B-203ENST00000554636 RANBP1P43487 201 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms