RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 ZNF251Q9BRH9 671 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 URM1Q9BTM9 101 aaKnown RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 GABARAPL1Q9H0R8 117 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 CST11Q9H112 138 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 PARP11Q9NR21 331 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 GSN-AS1Q9NRJ2 163 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 SIGLEC8Q9NYZ4 499 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 FOXA2Q9Y261 457 aaPredicted RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 SAMHD1Q9Y3Z3 626 aaKnown RBP3.64□□□□□ -1.83
ATXN3-228ENST00000554592 NUBP2Q9Y5Y2 271 aa3.64□□□□□ -1.83
ATXN3-228ENST00000554592 ZNF670-ZNF695F2Z2N8 137 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 G3V2T6 193 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 SDCBPO00560 298 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 SLC22A1O15245 554 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 SOX15O60248 233 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 CIDEAO60543 219 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 FCGR3BO75015 233 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 RPP14O95059 124 aaKnown RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 KRT8P05787 483 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 SPP1P10451 314 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 DBTP11182 482 aaKnown RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 ANXA8P13928 327 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 MT3P25713 68 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 SSTR5P35346 364 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 SERPINB10P48595 397 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 ZNF137PP52743 207 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 LINC01547P58512 204 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 ACTBP60709 375 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 CDK5Q00535 292 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 ZNF846Q147U1 533 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 ECSCRQ19T08 205 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 C5orf64Q2M2E5 130 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 MOGAT2Q3SYC2 334 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 AKIRIN2Q53H80 203 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 PAN3Q58A45 887 aaKnown RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 RSBN1Q5VWQ0 802 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 ELP2Q6IA86 826 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 CD200R1LQ6Q8B3 271 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 PLEKHG7Q6ZR37 379 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 SLC25A48Q6ZT89 311 aaKnown RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 LAX1Q8IWV1 398 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 C8orf59Q8N0T1 100 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 NHLRC2Q8NBF2 726 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 OR9G4Q8NGQ1 327 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 OR2K2Q8NGT1 345 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 CNIH3Q8TBE1 160 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 GIPC3Q8TF64 312 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 ARL11Q969Q4 196 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 ADAT3Q96EY9 351 aaPredicted RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 OPALINQ96PE5 141 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 SPACA5Q96QH8 159 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 CNN2Q99439 309 aaKnown RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 TTTY10Q9BZA0 68 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 PLEKHA3Q9HB20 300 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 NEK6Q9HC98 313 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 CLN6Q9NWW5 311 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 SLC2A8Q9NY64 477 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 TVP23BQ9NYZ1 205 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 CNOT2Q9NZN8 540 aaKnown RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 PAIP2BQ9ULR5 123 aaKnown RBP3.63□□□□□ -1.83
ATXN3-228ENST00000554592 TPRKBQ9Y3C4 175 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 FRAS1Q86XX4 4008 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 DNAH10Q8IVF4 4471 aa3.63□□□□□ -1.83
ATXN3-228ENST00000554592 TRAV39A0A0B4J263 110 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 A0A0G2JLM5 398 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 A0A1B0GVG6 124 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 C13orf42A0A1B0GVH6 325 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 TMEM30CPA0ZSE6 113 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 ZNF320A2RRD8 509 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 IZUMO1RA6ND01 250 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 CCDC182A6NF36 153 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 METTL15A6NJ78 407 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 OR11H12B2RN74 326 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 H3BMQ9 156 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 C15orf65H3BRN8 121 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 NBR2O15453 112 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 ST8SIA3O43173 380 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 LANCL1O43813 399 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 ORC5O43913 435 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 SULT1C4O75897 302 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 MT-ND2P03891 347 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 UBCP0CG48 685 aaKnown RBP3.62□□□□□ -1.83
ATXN3-228ENST00000554592 CRHBPP24387 322 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 CRIP2P52943 208 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-228ENST00000554592 SYNJ2BPP57105 145 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 TPPP2P59282 170 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 TNFRSF9Q07011 255 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 RGS21Q2M5E4 152 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 ACTBL2Q562R1 376 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 CT45A1Q5HYN5 189 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 TMEM244Q5VVB8 128 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 PRSS48Q7RTY5 328 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 TRPT1Q86TN4 253 aaKnown RBP3.62□□□□□ -1.83
ATXN3-228ENST00000554592 PPP1R27Q86WC6 154 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 SLC35F2Q8IXU6 374 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 PRSS35Q8N3Z0 413 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 DEFB125Q8N687 156 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 STPG4Q8N801 248 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 NPBQ8NG41 125 aa3.62□□□□□ -1.83
ATXN3-228ENST00000554592 OR5D18Q8NGL1 313 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms