RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SIGIRRQ6IA17 410 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 UQCC3Q6UW78 93 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 Q6ZR03 302 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 C9orf47Q6ZRZ4 202 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 MOB3CQ70IA8 216 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 TMED4Q7Z7H5 227 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 LRRC18Q8N456 261 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 GVQW1Q8N7I0 195 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 LRTM2Q8N967 370 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 INO80EQ8NBZ0 244 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-226ENST00000554350 OR10AD1Q8NGE0 317 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 OR51T1Q8NGJ9 327 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 OSR1Q8TAX0 266 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-226ENST00000554350 PPP1R1CQ8WVI7 109 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 NUDCD2Q8WVJ2 157 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 GALNT14Q96FL9 552 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 C2orf50Q96LR7 162 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 NICN1Q9BSH3 213 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 PDCD10Q9BUL8 212 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 ST6GALNAC5Q9BVH7 336 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 OR2H1Q9GZK4 316 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 FXYD6Q9H0Q3 95 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 RHOFQ9HBH0 211 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 RDH8Q9NYR8 311 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 PIGLQ9Y2B2 252 aa4.44□□□□□ -1.7
ATXN3-226ENST00000554350 HUWE1Q7Z6Z7 4374 aaKnown RBP4.44□□□□□ -1.7
ATXN3-226ENST00000554350 hCG_38984A0A1B0GV85 526 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 RAB19A4D1S5 217 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 TEX46H3BTG2 121 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 I3L521 148 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 CST4P01036 141 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 NRASP01111 189 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 PMP2P02689 132 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 CSTBP04080 98 aaKnown RBP4.43□□□□□ -1.7
ATXN3-226ENST00000554350 MMP7P09237 267 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-226ENST00000554350 SLC2A1P11166 492 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 ZNF32P17041 273 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 MYCNOSP40205 109 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 UBE2E1P51965 193 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 MTCP1P56278 107 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 BLCAPP62952 87 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 PSG4Q00888 419 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 PSG7Q13046 419 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 SLC22A6Q4U2R8 563 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 PABPC1L2AQ5JQF8 200 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 AADACL3Q5VUY0 350 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 ELP2Q6IA86 826 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 OR52W1Q6IF63 320 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 EIF5AL1Q6IS14 154 aaKnown RBP4.43□□□□□ -1.7
ATXN3-226ENST00000554350 PRSS54Q6PEW0 395 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 C10orf99Q6UWK7 81 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 OR11L1Q8NGX0 322 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 SUN5Q8TC36 379 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 MARCH1Q8TCQ1 289 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 TMEM230Q96A57 120 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 CMBLQ96DG6 245 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 BORCS8Q96FH0 119 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 REEP6Q96HR9 211 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 ARHGAP5-AS1Q96IT6 56 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 AQP10Q96PS8 301 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 ARPC5LQ9BPX5 153 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 RTBDNQ9BSG5 229 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-226ENST00000554350 WNT5BQ9H1J7 359 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 C5orf66Q9H5L9 145 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 CHMP1AQ9HD42 196 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-226ENST00000554350 TMEM100Q9NV29 134 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 PLEKHJ1Q9NW61 149 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 C1orf123Q9NWV4 160 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 SDHAF2Q9NX18 166 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 ANXA10Q9UJ72 324 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 SLC7A11Q9UPY5 501 aa4.43□□□□□ -1.7
ATXN3-226ENST00000554350 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-226ENST00000554350 DVL1O14640 695 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 FGF16O43320 207 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 SPRY2O43597 315 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 LCATP04180 440 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 CTXN2P0C2S0 81 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 TMEM225BP0DP42 221 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 TPT1P13693 172 aaKnown RBP4.42□□□□□ -1.7
ATXN3-226ENST00000554350 AKR1C4P17516 323 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 NUP62P37198 522 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-226ENST00000554350 RAB13P51153 203 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 SUPT4H1P63272 117 aaKnown RBP4.42□□□□□ -1.7
ATXN3-226ENST00000554350 FAM3AP98173 230 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 PDZK1IP1Q13113 114 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 RSU1Q15404 277 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 SNAI3Q3KNW1 292 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 NCR3LG1Q68D85 454 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 C18orf65Q6ZTR6 163 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 LINC00596Q86U02 117 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 SGPP2Q8IWX5 399 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 BAP18Q8IXM2 172 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 FAM185AQ8N0U4 392 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 OSR2Q8N2R0 312 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 MAPKAPK5-AS1Q8N8E1 139 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 ADAD2Q8NCV1 583 aaKnown RBP4.42□□□□□ -1.7
ATXN3-226ENST00000554350 KLHL30-AS1Q8NEE0 82 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 CSNK2A3Q8NEV1 391 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 OR13G1Q8NGZ3 307 aa4.42□□□□□ -1.7
ATXN3-226ENST00000554350 OR1S1Q8NH92 325 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms