RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
SHMT2-207ENST00000553837 PGLYRP1O75594 196 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-207ENST00000553837 PPP1CBP62140 327 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 ARG2P78540 354 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 ALKBH6Q3KRA9 238 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 TMEM144Q7Z5S9 345 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 RPP25LQ8N5L8 163 aaKnown RBP10.28□□□□□ -0.76
SHMT2-207ENST00000553837 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 TAF15Q92804 592 aaKnown RBP eCLIP10.28□□□□□ -0.76
SHMT2-207ENST00000553837 NEIL1Q96FI4 390 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-207ENST00000553837 CIB3Q96Q77 187 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-207ENST00000553837 ZDHHC11Q9H8X9 412 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 ATP23Q9Y6H3 246 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 ANKRD30BLA7E2S9 258 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 F6UZH7 168 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 NDUFB8O95169 186 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 SERPINE2P07093 398 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 CTXN2P0C2S0 81 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 OR5G3P0C626 314 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 F2RP25116 425 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 ARL16Q0P5N6 197 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 Q6ZWC4 215 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 OR4C12Q96R67 309 aa10.28□□□□□ -0.76
SHMT2-207ENST00000553837 DSPP15924 2871 aaKnown RBP10.27□□□□□ -0.77
SHMT2-207ENST00000553837 A0A0G2JRQ6 117 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 IGHV3-64DA0A0J9YX35 117 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 CTXND1A0A1B0GTU2 59 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 A0A1B0GUS0 222 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 AQP7O14520 342 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 NKX2-8O15522 239 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 ESDP10768 282 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 GNG3P63215 75 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 TRIP6Q15654 476 aaKnown RBP10.27□□□□□ -0.77
SHMT2-207ENST00000553837 FAM58AQ8N1B3 248 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 LRFN3Q9BTN0 628 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 DLL3Q9NYJ7 618 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 MPC1Q9Y5U8 109 aa10.27□□□□□ -0.77
SHMT2-207ENST00000553837 TRAV30A0A087WSZ9 112 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 WDR1O75083 606 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 BMP5P22003 454 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 IGHV1-2P23083 117 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 YPEL3P61236 119 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-207ENST00000553837 ZNF324BQ6AW86 544 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-207ENST00000553837 Q6P435 159 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 COX11Q9Y6N1 276 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 KIR2DS1A0A191URI9 304 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 OR5B21A6NL26 309 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 AHRRA9YTQ3 701 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 MLNRO43193 412 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 IAPPP10997 89 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 WT1P19544 449 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-207ENST00000553837 CD33P20138 364 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 KIR2DS4P43632 304 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 HOXA4Q00056 320 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-207ENST00000553837 KIR2DS1Q14954 304 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 HAPLN4Q86UW8 402 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 LRP11Q86VZ4 500 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 OR5AU1Q8NGC0 362 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 VN1R17PQ8TDU5 208 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 LSM10Q969L4 123 aaKnown RBP10.26□□□□□ -0.77
SHMT2-207ENST00000553837 HSPB9Q9BQS6 159 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 PATZ1Q9HBE1 687 aaKnown RBP10.26□□□□□ -0.77
SHMT2-207ENST00000553837 WIPI2Q9Y4P8 454 aa10.26□□□□□ -0.77
SHMT2-207ENST00000553837 LYZL6O75951 148 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 IGKV1D-33P01593 117 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 IGKV1-33P01594 117 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 ADMP35318 185 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 MSMO1Q15800 293 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 FBLN7Q53RD9 439 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 OCIAD2Q56VL3 154 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 OR4B1Q8NGF8 309 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 UBALD1Q8TB05 177 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 ELOVL5Q9NYP7 299 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 OR1A1Q9P1Q5 309 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 TRBV6-6A0A0A6YYG2 114 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 RNF212BA8MTL3 300 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 K7ERU9 68 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 PAGE4O60829 102 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 SMPD2O60906 423 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 TLE1Q04724 770 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 OR10G9Q8NGN4 311 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 OR10G7Q8NGN6 311 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 PKIBQ9C010 78 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 ZNF430Q9H8G1 570 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-207ENST00000553837 CACNG5Q9UF02 275 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 SLC45A2Q9UMX9 530 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 DMXL1Q9Y485 3027 aa10.25□□□□□ -0.77
SHMT2-207ENST00000553837 CUL9Q8IWT3 2517 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 PRR14LQ5THK1 2151 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 IGHV2OR16-5A0A0B4J2B6 119 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 UBE2L5PA0A1B0GUS4 154 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 J3QT63 122 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 HMGB3O15347 200 aaKnown RBP10.24□□□□□ -0.77
SHMT2-207ENST00000553837 MMP23AO75900 390 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 KRASP01116 189 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 IGLV2-14P01704 120 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 CCL11P51671 97 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 SLC38A11Q08AI6 406 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 Q6ZRM9 215 aa10.24□□□□□ -0.77
SHMT2-207ENST00000553837 LINC00596Q86U02 117 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms