RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
PRKCH-206ENST00000553830 PLXNB1O43157 2135 aa11.32□□□□□ -0.6
PRKCH-206ENST00000553830 OTOGQ6ZRI0 2925 aa11.32□□□□□ -0.6
PRKCH-206ENST00000553830 HIVEP2P31629 2446 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 ZNF469Q96JG9 3925 aaPredicted RBP11.31□□□□□ -0.6
PRKCH-206ENST00000553830 A0A0G2JRQ6 117 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 MARCH11A6NNE9 402 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 SLC25A17O43808 307 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 NXPH3O95157 252 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 HRASP01112 189 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 IFNA21P01568 189 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 IGKV1-5P01602 117 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 IGHV4-59P01825 116 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 FAM106CPP0CH98 169 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 NQO2P16083 231 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 SRD5A1P18405 259 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 RRAS2P62070 204 aaPredicted RBP11.31□□□□□ -0.6
PRKCH-206ENST00000553830 PLGLAQ15195 96 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 TMEM177Q53S58 311 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 H2BFWTQ7Z2G1 175 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 CADM3Q8N126 398 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 RRNAD1Q96FB5 475 aaKnown RBP11.31□□□□□ -0.6
PRKCH-206ENST00000553830 DUX5Q96PT3 197 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 CHIAQ9BZP6 476 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 PLEKHA2Q9HB19 425 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 TMEM160Q9NX00 188 aa11.31□□□□□ -0.6
PRKCH-206ENST00000553830 A0A0B4J2A0 478 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 NCBP2LA6PVI3 153 aaKnown RBP11.3□□□□□ -0.6
PRKCH-206ENST00000553830 MPTX1A8MV57 137 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 RBMXL2O75526 392 aaKnown RBP11.3□□□□□ -0.6
PRKCH-206ENST00000553830 ATG12O94817 140 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 SAA1P0DJI8 122 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-206ENST00000553830 F2RL1P55085 397 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 OR2B8PP59922 312 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 HABP2Q14520 560 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-206ENST00000553830 VMA21Q3ZAQ7 101 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 C9orf139Q6ZV77 190 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 FAM219AQ8IW50 185 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 OSR1Q8TAX0 266 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-206ENST00000553830 IL22RA2Q969J5 263 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 GPR146Q96CH1 333 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 SEC22AQ96IW7 307 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 RHOVQ96L33 236 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 CLCC1Q96S66 551 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 TSNAXQ99598 290 aaKnown RBP11.3□□□□□ -0.6
PRKCH-206ENST00000553830 FBXL15Q9H469 300 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 TPSG1Q9NRR2 321 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 FAM212BQ9NTI7 297 aaPredicted RBP11.3□□□□□ -0.6
PRKCH-206ENST00000553830 SHPKQ9UHJ6 478 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
PRKCH-206ENST00000553830 TRAV3A0A0B4J244 114 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 BTBD17A6NE02 478 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 FAM90A9PA6NNJ1 464 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 NBR2O15453 112 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 HOXA3O43365 443 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-206ENST00000553830 IGLV2-23P01705 113 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 OR9G9P0C7N8 305 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 BCAP31P51572 246 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 THOC7Q6I9Y2 204 aaKnown RBP11.29□□□□□ -0.6
PRKCH-206ENST00000553830 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 GSG1LQ6UXU4 331 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 LRTM2Q8N967 370 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 OR11H7Q8NGC8 314 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 PDCD10Q9BUL8 212 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 RANBP3Q9H6Z4 567 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-206ENST00000553830 GSKIPQ9P0R6 139 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 KIAA1456Q9P272 454 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 METTL1Q9UBP6 276 aaKnown RBP11.29□□□□□ -0.6
PRKCH-206ENST00000553830 CACNG5Q9UF02 275 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 CDC42EP3Q9UKI2 254 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 TNCP24821 2201 aa11.29□□□□□ -0.6
PRKCH-206ENST00000553830 SH2D7A6NKC9 451 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-206ENST00000553830 DBX1A6NMT0 343 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 SCGB1D2O95969 90 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 CXCL3P19876 107 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 VDAC1P21796 283 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 LGALS7P47929 136 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 DYNLT3P51808 116 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 GNB1P62873 340 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 PSG5Q15238 335 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 IAH1Q2TAA2 248 aaPredicted RBP11.28□□□□□ -0.6
PRKCH-206ENST00000553830 RBMS3Q6XE24 437 aaKnown RBP11.28□□□□□ -0.6
PRKCH-206ENST00000553830 Q6YL49 198 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 OR1S1Q8NH92 325 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 OR10C1Q96KK4 312 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 SLC25A33Q9BSK2 321 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 RAB18Q9NP72 206 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 TMED3Q9Y3Q3 217 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 MMP24Q9Y5R2 645 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 CELSR1Q9NYQ6 3014 aa11.28□□□□□ -0.6
PRKCH-206ENST00000553830 HIVEP1P15822 2718 aa11.27□□□□□ -0.61
PRKCH-206ENST00000553830 DUXBA0A1W2PPF3 345 aa11.27□□□□□ -0.61
PRKCH-206ENST00000553830 HMX3A6NHT5 357 aa11.27□□□□□ -0.61
PRKCH-206ENST00000553830 RRHO14718 337 aa11.27□□□□□ -0.61
PRKCH-206ENST00000553830 SNAPC5O75971 98 aa11.27□□□□□ -0.61
PRKCH-206ENST00000553830 OR2A4O95047 310 aa11.27□□□□□ -0.61
PRKCH-206ENST00000553830 OPN1MWP04001 364 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms