RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 DHRS11Q6UWP2 260 aa15.85■□□□□ 0.13
FOXA1-203ENST00000553751 ZNF818PQ6ZRF7 136 aa15.85■□□□□ 0.13
FOXA1-203ENST00000553751 TMEM17Q86X19 198 aa15.85■□□□□ 0.13
FOXA1-203ENST00000553751 ZBTB34Q8NCN2 500 aa15.85■□□□□ 0.13
FOXA1-203ENST00000553751 OR4S2Q8NH73 311 aa15.85■□□□□ 0.13
FOXA1-203ENST00000553751 CASTOR1Q8WTX7 329 aa15.85■□□□□ 0.13
FOXA1-203ENST00000553751 GNB4Q9HAV0 340 aa15.85■□□□□ 0.13
FOXA1-203ENST00000553751 CNIH1O95406 144 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 HLA-DMAP28067 261 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 HRH1P35367 487 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 HERV-K104P61576 105 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 PRSS8Q16651 343 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 PDLIM3Q53GG5 364 aaPredicted RBP15.84■□□□□ 0.13
FOXA1-203ENST00000553751 PYHIN1Q6K0P9 492 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 OR5M8Q8NGP6 311 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 MOB3AQ96BX8 217 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 ZNF2Q9BSG1 426 aaPredicted RBP15.84■□□□□ 0.13
FOXA1-203ENST00000553751 DCUN1D5Q9BTE7 237 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 MIXL1Q9H2W2 232 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 EXTL2Q9UBQ6 330 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 VSIG4Q9Y279 399 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 TNCP24821 2201 aa15.84■□□□□ 0.13
FOXA1-203ENST00000553751 I3L521 148 aa15.83■□□□□ 0.12
FOXA1-203ENST00000553751 SULT1C2O00338 296 aa15.83■□□□□ 0.12
FOXA1-203ENST00000553751 RCVRNP35243 200 aa15.83■□□□□ 0.12
FOXA1-203ENST00000553751 FHL3Q13643 280 aa15.83■□□□□ 0.12
FOXA1-203ENST00000553751 ASPHD1Q5U4P2 390 aa15.83■□□□□ 0.12
FOXA1-203ENST00000553751 DYNC2LI1Q8TCX1 351 aa15.83■□□□□ 0.12
FOXA1-203ENST00000553751 FXYD6Q9H0Q3 95 aa15.83■□□□□ 0.12
FOXA1-203ENST00000553751 CCDC59Q9P031 241 aaKnown RBP15.83■□□□□ 0.12
FOXA1-203ENST00000553751 RAMP3O60896 148 aa15.82■□□□□ 0.12
FOXA1-203ENST00000553751 GNRHRP30968 328 aa15.82■□□□□ 0.12
FOXA1-203ENST00000553751 KIR2DS2P43631 304 aa15.82■□□□□ 0.12
FOXA1-203ENST00000553751 RUNX1Q01196 453 aa15.82■□□□□ 0.12
FOXA1-203ENST00000553751 LAX1Q8IWV1 398 aa15.82■□□□□ 0.12
FOXA1-203ENST00000553751 VKORC1L1Q8N0U8 176 aa15.82■□□□□ 0.12
FOXA1-203ENST00000553751 ZNF430Q9H8G1 570 aaPredicted RBP15.82■□□□□ 0.12
FOXA1-203ENST00000553751 H3BMQ9 156 aa15.81■□□□□ 0.12
FOXA1-203ENST00000553751 CTDSP2O14595 271 aa15.81■□□□□ 0.12
FOXA1-203ENST00000553751 TPPPO94811 219 aa15.81■□□□□ 0.12
FOXA1-203ENST00000553751 DUS4LO95620 317 aaKnown RBP15.81■□□□□ 0.12
FOXA1-203ENST00000553751 TNXAQ16473 311 aa15.81■□□□□ 0.12
FOXA1-203ENST00000553751 FOXB2Q5VYV0 432 aa15.81■□□□□ 0.12
FOXA1-203ENST00000553751 ISOC1Q96CN7 298 aa15.81■□□□□ 0.12
FOXA1-203ENST00000553751 OR5B12Q96R08 314 aa15.81■□□□□ 0.12
FOXA1-203ENST00000553751 ABHD1Q96SE0 405 aa15.81■□□□□ 0.12
FOXA1-203ENST00000553751 RGS5O15539 181 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 RBFOX2O43251 390 aaKnown RBP eCLIP15.8■□□□□ 0.12
FOXA1-203ENST00000553751 CREBL2O60519 120 aaPredicted RBP15.8■□□□□ 0.12
FOXA1-203ENST00000553751 PRB2P02812 416 aaPredicted RBP15.8■□□□□ 0.12
FOXA1-203ENST00000553751 RAB25P57735 213 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 CATR1Q13166 79 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 RNASE12Q5GAN4 147 aaKnown RBP15.8■□□□□ 0.12
FOXA1-203ENST00000553751 SPAG16Q8N0X2 631 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 PUSL1Q8N0Z8 303 aaKnown RBP15.8■□□□□ 0.12
FOXA1-203ENST00000553751 POC5Q8NA72 575 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 OR11H1Q8NG94 326 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 OR6F1Q8NGZ6 308 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 SRSF12Q8WXF0 261 aaKnown RBP15.8■□□□□ 0.12
FOXA1-203ENST00000553751 BORCS5Q969J3 196 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 TMEM68Q96MH6 324 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 MS4A10Q96PG2 267 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 SLA2Q9H6Q3 261 aa15.8■□□□□ 0.12
FOXA1-203ENST00000553751 H3BUA1 57 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 NOL3O60936 208 aaKnown RBP15.79■□□□□ 0.12
FOXA1-203ENST00000553751 KBTBD11O94819 623 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 TPPP2P59282 170 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 AADACL3Q5VUY0 350 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 MMD2Q8IY49 270 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 OR5T1Q8NG75 326 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 OR51H1Q8NH63 302 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 OR52I2Q8NH67 350 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 RHOVQ96L33 236 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 ALX4Q9H161 411 aaPredicted RBP15.79■□□□□ 0.12
FOXA1-203ENST00000553751 KLK11Q9UBX7 282 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 SCOCQ9UIL1 159 aa15.79■□□□□ 0.12
FOXA1-203ENST00000553751 MSGN1A6NI15 193 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 OR2A4O95047 310 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 LGALS1P09382 135 aaKnown RBP15.78■□□□□ 0.12
FOXA1-203ENST00000553751 CD40LGP29965 261 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 VAX1Q5SQQ9 334 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 C10orf55Q5SWW7 151 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 VSTM2AQ8TAG5 236 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 TMEM167AQ8TBQ9 72 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 C15orf40Q8WUR7 153 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 OR2A7Q96R45 310 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 PHB2Q99623 299 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 MCRIP2Q9BUT9 160 aaKnown RBP15.78■□□□□ 0.12
FOXA1-203ENST00000553751 CEPT1Q9Y6K0 416 aa15.78■□□□□ 0.12
FOXA1-203ENST00000553751 HRASP01112 189 aa15.77■□□□□ 0.12
FOXA1-203ENST00000553751 TRGV3P03979 118 aa15.77■□□□□ 0.12
FOXA1-203ENST00000553751 RLN1P04808 185 aa15.77■□□□□ 0.12
FOXA1-203ENST00000553751 APELAP0DMC3 54 aa15.77■□□□□ 0.12
FOXA1-203ENST00000553751 TSPAN5P62079 268 aa15.77■□□□□ 0.12
FOXA1-203ENST00000553751 ZNF616Q08AN1 781 aa15.77■□□□□ 0.12
FOXA1-203ENST00000553751 OR1N2Q8NGR9 330 aa15.77■□□□□ 0.12
FOXA1-203ENST00000553751 SLIRPQ9GZT3 109 aaKnown RBP15.77■□□□□ 0.12
FOXA1-203ENST00000553751 MTFP1Q9UDX5 166 aa15.77■□□□□ 0.12
FOXA1-203ENST00000553751 M0QYG6 137 aa15.76■□□□□ 0.11
FOXA1-203ENST00000553751 GPR31O00270 319 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms