RNA–Protein interactions for RNA: ENST00000553709.5

ARHGEF40-202, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 5,204 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-202ENST00000553709 FADS6Q8N9I5 356 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 OR4A5Q8NH83 315 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 RBM14Q96PK6 669 aaKnown RBP13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 PARLQ9H300 379 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 AKIRIN1Q9H9L7 192 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 LPAR2Q9HBW0 351 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 DNAJC4Q9NNZ3 241 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 IFITM10A6NMD0 228 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 HERVK_113P61574 105 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 DGAT2L7PQ6IED9 249 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 PET117Q6UWS5 81 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 Q6ZT83 130 aa13.06□□□□□ -0.32
ARHGEF40-202ENST00000553709 SLC25A53Q5H9E4 307 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 GP6Q9HCN6 339 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 ZNF729A6NN14 1252 aaPredicted RBP13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 J3QRE1 110 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 TMEM30BQ3MIR4 351 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 SPSB4Q96A44 273 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 QTRT1Q9BXR0 403 aaKnown RBP13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 RNF222A6NCQ9 220 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 KBTBD11O94819 623 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 MGPP08493 103 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 VKORC1L1Q8N0U8 176 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 SIGLEC12Q96PQ1 595 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 SFXN3Q9BWM7 321 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 TMEM189A5PLL7 270 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 A6NDN8 102 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 CELA3AP09093 270 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 ZNF506Q5JVG8 444 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 SPANXN1Q5VSR9 72 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 SHISA5Q8N114 240 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 MYOZ3Q8TDC0 251 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 MRPL18Q9H0U6 180 aaKnown RBP13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 RABAC1Q9UI14 185 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 CDC42EP3Q9UKI2 254 aa13.05□□□□□ -0.32
ARHGEF40-202ENST00000553709 A8MXK9 166 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 NRN1LQ496H8 165 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 TMEM171Q8WVE6 324 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 CARHSP1Q9Y2V2 147 aaKnown RBP13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 TCF21O43680 179 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 LINC00518Q8N0U6 118 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 RPRMQ9NS64 109 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 CDX1P47902 265 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 EFNB1P98172 346 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 GPR61Q9BZJ8 451 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 TRAV14DV4A0A0A6YYC5 116 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 UCP1P25874 307 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 NUBP1P53384 320 aa13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 ZNF385CQ66K41 422 aaPredicted RBP13.04□□□□□ -0.32
ARHGEF40-202ENST00000553709 MTCL1Q9Y4B5 1905 aaKnown RBP13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 C1QTNF5Q9BXJ0 243 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 PLSCR2Q9NRY7 297 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 HSPB7Q9UBY9 170 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 ZNF146Q15072 292 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 OR4C13Q8NGP0 309 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 TMEM250H0YL14 139 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 WNT9BO14905 357 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 CRYBB3P26998 211 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 IMMP1LQ96LU5 166 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 C19orf24Q9BVV8 132 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 MRPL13Q9BYD1 178 aaKnown RBP13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 DCAF16Q9NXF7 216 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 OR9G1Q8NH87 305 aa13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 RCC1LQ96I51 464 aaKnown RBP13.03□□□□□ -0.32
ARHGEF40-202ENST00000553709 IGLV3-12A0A075B6K2 115 aa13.02□□□□□ -0.32
ARHGEF40-202ENST00000553709 LOC389332A0A1B0GUA5 103 aa13.02□□□□□ -0.32
ARHGEF40-202ENST00000553709 PRR32B1ATL7 298 aa13.02□□□□□ -0.32
ARHGEF40-202ENST00000553709 KIR2DL2P43627 348 aaPredicted RBP13.02□□□□□ -0.32
ARHGEF40-202ENST00000553709 COMPP49747 757 aaPredicted RBP13.02□□□□□ -0.32
ARHGEF40-202ENST00000553709 TWIST1Q15672 202 aa13.02□□□□□ -0.32
ARHGEF40-202ENST00000553709 ZNF837Q96EG3 531 aaPredicted RBP13.02□□□□□ -0.32
ARHGEF40-202ENST00000553709 ZFP30Q9Y2G7 519 aa13.02□□□□□ -0.32
ARHGEF40-202ENST00000553709 COL4A6Q14031 1691 aa13.02□□□□□ -0.32
ARHGEF40-202ENST00000553709 C12orf77C9JDV5 145 aa13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 TRGC1P0CF51 173 aa13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 FAM106CPP0CH98 169 aa13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 FXYD3Q14802 87 aa13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 MRPL14Q6P1L8 145 aaKnown RBP13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 TMEM186Q96B77 213 aa13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 NABP2Q9BQ15 211 aa13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 A0A087WV48 116 aa13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 AMY1AP04745 511 aa13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 STPG3Q8N7X2 389 aa13.02□□□□□ -0.33
ARHGEF40-202ENST00000553709 TRBV23-1A0A0A0MS06 115 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 A0A0G2JMM0 328 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 A0A1W2PPB8 328 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 A0A1W2PRS3 328 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 KIR3DP1A8MWS1 328 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 RPL24P83731 157 aaKnown RBP13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 COL5A1-AS1Q5SY13 56 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 REPIN1Q9BWE0 567 aaKnown RBP13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 FBLN5Q9UBX5 448 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 HTN1P15515 57 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 ID1P41134 155 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 GAS1P54826 345 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 TMEM78Q5T7P6 136 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 ACP7Q6ZNF0 438 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 ZNRF1Q8ND25 227 aa13.01□□□□□ -0.33
ARHGEF40-202ENST00000553709 OR4B1Q8NGF8 309 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms