RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 S100PBPQ96BU1 408 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 CMTM5Q96DZ9 223 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 NEURL3Q96EH8 262 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 BIRC8Q96P09 236 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 IP6K3Q96PC2 410 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 SUCNR1Q9BXA5 334 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 METTL9Q9H1A3 318 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 INIPQ9NRY2 104 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 TAS2R13Q9NYV9 303 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 TAC3Q9UHF0 121 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 C14orf166Q9Y224 244 aaKnown RBP1.86□□□□□ -2.11
SCFD1-210ENST00000553693 PUS1Q9Y606 427 aaKnown RBP eCLIP1.86□□□□□ -2.11
SCFD1-210ENST00000553693 VPS13CQ709C8 3753 aa1.86□□□□□ -2.11
SCFD1-210ENST00000553693 NUP214P35658 2090 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-210ENST00000553693 DOCK4Q8N1I0 1966 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 ZANQ9Y493 2812 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 TRAV17A0A0B4J275 112 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 A0A1B0GX12 115 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 PGPA6NDG6 321 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 FABP12A6NFH5 140 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 ZNF850A8MQ14 1090 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 BTNL10A8MVZ5 291 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 E7EQ34 232 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 M0QXV9 152 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 ITGB1BP1O14713 200 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 SSNA1O43805 119 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 MPZL2O60487 215 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 SOX14O95416 240 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 NRASP01111 189 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 HRASP01112 189 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 KRASP01116 189 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 CD74P04233 296 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 ZNF7P17097 686 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-210ENST00000553693 MPV17P39210 176 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 HSPA13P48723 471 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 STC1P52823 247 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 BLVRAP53004 296 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 AP1S1P61966 158 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 DCDP81605 110 aaKnown RBP1.85□□□□□ -2.11
SCFD1-210ENST00000553693 SSX1Q16384 188 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 CEACAM16Q2WEN9 425 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 DEFB113Q30KQ7 82 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 ZNF404Q494X3 552 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 PTRHD1Q6GMV3 140 aaKnown RBP1.85□□□□□ -2.11
SCFD1-210ENST00000553693 PRSS54Q6PEW0 395 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 FAM19A1Q7Z5A9 133 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 ZDHHC22Q8N966 263 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 OR2M7Q8NG81 312 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 OR11G2Q8NGC1 345 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 OR8A1Q8NGG7 326 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 OR4P4Q8NGL7 312 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 JOSD2Q8TAC2 188 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 ACTL9Q8TC94 416 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 CPNE4Q96A23 557 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-210ENST00000553693 FMC1Q96HJ9 113 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 TMEM56Q96MV1 263 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 RBP7Q96R05 134 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 ANGPTL4Q9BY76 406 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 LRRC19Q9H756 370 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 FAM60AQ9NP50 221 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 DHCR7Q9UBM7 475 aaKnown RBP1.85□□□□□ -2.11
SCFD1-210ENST00000553693 RFNGQ9Y644 331 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 SLC22A7Q9Y694 548 aa1.85□□□□□ -2.11
SCFD1-210ENST00000553693 NCOA6Q14686 2063 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-210ENST00000553693 ANK3Q12955 4377 aaKnown RBP1.84□□□□□ -2.11
SCFD1-210ENST00000553693 TRAV8-3A0A0A6YYJ7 113 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 CEACAM18A8MTB9 384 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 GOLGA8KD6RF30 607 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 FTCDNL1E5RQL4 147 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 F5H5K5 113 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 GOLGA8MH3BSY2 632 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 K7ERS5 55 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 NIPSNAP2O75323 286 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 PSIP1O75475 530 aaKnown RBP1.84□□□□□ -2.11
SCFD1-210ENST00000553693 CBR3O75828 277 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 CCNKO75909 580 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 PSMG1O95456 288 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 ORM1P02763 201 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 SOD3P08294 240 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 LINC00869P0C866 280 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 IMPA1P29218 277 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 SLC6A1P30531 599 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 MAGEA2P43356 314 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 GABRA4P48169 554 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 SPINT3P49223 89 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 MAXP61244 160 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 MEF2CQ06413 473 aaPredicted RBP1.84□□□□□ -2.11
SCFD1-210ENST00000553693 MED21Q13503 144 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 DEFB110Q30KQ9 67 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 Q499Y3 187 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 LUZP6Q538Z0 58 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 PDZD11Q5EBL8 140 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 HENMT1Q5T8I9 393 aaKnown RBP1.84□□□□□ -2.11
SCFD1-210ENST00000553693 NIPAL1Q6NVV3 410 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 MED27Q6P2C8 311 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 C16orf47Q6ZP98 133 aaPredicted RBP1.84□□□□□ -2.11
SCFD1-210ENST00000553693 OOSP2Q86WS3 158 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 RPRMLQ8N4K4 120 aa1.84□□□□□ -2.11
SCFD1-210ENST00000553693 OR4E2Q8NGC2 313 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms