RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 TMEM106BQ9NUM4 274 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 SLC25A10Q9UBX3 287 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-218ENST00000553486 CARHSP1Q9Y2V2 147 aaKnown RBP12.62□□□□□ -0.39
ABCD4-218ENST00000553486 LINC00312Q9Y6C7 94 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 HRNRQ86YZ3 2850 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-218ENST00000553486 AKAP6Q13023 2319 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 YLPM1P49750 1951 aaKnown RBP12.62□□□□□ -0.39
ABCD4-218ENST00000553486 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-218ENST00000553486 RBMXL2O75526 392 aaKnown RBP12.62□□□□□ -0.39
ABCD4-218ENST00000553486 IGHV3-7P01780 117 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 NFYBP25208 207 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 FHITP49789 147 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 MEF2CQ06413 473 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-218ENST00000553486 RPL39P5Q59GN2 51 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 CT45A1Q5HYN5 189 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 TCF23Q7RTU1 214 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 LILRB2Q8N423 598 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.62□□□□□ -0.39
ABCD4-218ENST00000553486 CT45A3Q8NHU0 189 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 CCL17Q92583 94 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 NEUROG1Q92886 237 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 FAM96BQ9Y3D0 163 aa12.62□□□□□ -0.39
ABCD4-218ENST00000553486 SLC31A2O15432 143 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 ERVK-16P61578 105 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 PEA15Q15121 130 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 AKR1C8PQ5T2L2 129 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 TMEM14EPQ6UXP3 125 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 ZNF525Q8N782 197 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 OR10A7Q8NGE5 316 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 LINC01560Q8TB33 94 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 ADTRPQ96IZ2 230 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 GAL3ST2Q9H3Q3 398 aa12.61□□□□□ -0.39
ABCD4-218ENST00000553486 LY86O95711 162 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 ADCYAP1P18509 176 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 THBS3P49746 956 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 ATRAIDQ6UW56 229 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 DPPA3Q6W0C5 159 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 THNSL2Q86YJ6 484 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 DTD1Q8TEA8 209 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 LEAP2Q969E1 77 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 PARD6GQ9BYG4 376 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-218ENST00000553486 NKX6-2Q9C056 277 aaPredicted RBP12.6□□□□□ -0.39
ABCD4-218ENST00000553486 RPUSD1Q9UJJ7 312 aaKnown RBP12.6□□□□□ -0.39
ABCD4-218ENST00000553486 NQO2P16083 231 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 MRPS11P82912 194 aaKnown RBP12.6□□□□□ -0.39
ABCD4-218ENST00000553486 RUNX1Q01196 453 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 ARL16Q0P5N6 197 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 GUK1Q16774 197 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 ATP6V1FQ16864 119 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 HAPLN4Q86UW8 402 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 ZNF439Q8NDP4 499 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 OR4S2Q8NH73 311 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 PBDC1Q9BVG4 233 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 CISD1Q9NZ45 108 aaKnown RBP12.6□□□□□ -0.39
ABCD4-218ENST00000553486 RFNGQ9Y644 331 aa12.6□□□□□ -0.39
ABCD4-218ENST00000553486 BTBD17A6NE02 478 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 CEBPZOSA8MTT3 80 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 NDUFB3O43676 98 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 RPL31P62899 125 aaKnown RBP12.59□□□□□ -0.39
ABCD4-218ENST00000553486 SLC38A11Q08AI6 406 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 LRRC75BQ2VPJ9 315 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 LRRC10Q5BKY1 277 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 PRAMEF5Q5TYX0 476 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 LYG1Q8N1E2 194 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 OR4A16Q8NH70 328 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 DDB2Q92466 427 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 DOCK11Q5JSL3 2073 aa12.59□□□□□ -0.39
ABCD4-218ENST00000553486 SAA2-SAA4A0A096LPE2 208 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 A0A1W2PPE3 182 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 TNFRSF13BO14836 293 aaPredicted RBP12.58□□□□□ -0.4
ABCD4-218ENST00000553486 SCAF4O95104 1147 aaKnown RBP12.58□□□□□ -0.4
ABCD4-218ENST00000553486 SNAPINO95295 136 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 SFTA3P0C7M3 94 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 SAA2P0DJI9 122 aaPredicted RBP12.58□□□□□ -0.4
ABCD4-218ENST00000553486 AARDQ4LEZ3 155 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 FOXC2Q99958 501 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 PSMG3Q9BT73 122 aaPredicted RBP12.58□□□□□ -0.4
ABCD4-218ENST00000553486 ARFGEF3Q5TH69 2177 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 IGHV1-69-2A0A0G2JMI3 117 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 PPIHO43447 177 aaKnown RBP12.58□□□□□ -0.4
ABCD4-218ENST00000553486 NDUFA2O43678 99 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 H2AFB1P0C5Y9 115 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 OR9G9P0C7N8 305 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 DAOP14920 347 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 GNG10P50151 68 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 RAB2AP61019 212 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 UTF1Q5T230 341 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 OR8G2PQ6IF36 304 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 SLC25A48Q6ZT89 311 aaKnown RBP12.58□□□□□ -0.4
ABCD4-218ENST00000553486 OR4C12Q96R67 309 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 CLCC1Q96S66 551 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 QTRT1Q9BXR0 403 aaKnown RBP12.58□□□□□ -0.4
ABCD4-218ENST00000553486 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
ABCD4-218ENST00000553486 FBXO7Q9Y3I1 522 aa12.58□□□□□ -0.4
ABCD4-218ENST00000553486 ROS1P08922 2347 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 ABCA4P78363 2273 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 A0A1B0GW64 132 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 PLAUP00749 431 aa12.57□□□□□ -0.4
ABCD4-218ENST00000553486 IFNA17P01571 189 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms