RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ZNF818PQ6ZRF7 136 aa14.9□□□□□ -0.02
PTCH1-227ENST00000553256 SECTM1Q8WVN6 248 aa14.9□□□□□ -0.02
PTCH1-227ENST00000553256 MOB3AQ96BX8 217 aa14.9□□□□□ -0.02
PTCH1-227ENST00000553256 TMEM68Q96MH6 324 aa14.9□□□□□ -0.02
PTCH1-227ENST00000553256 MIXL1Q9H2W2 232 aa14.9□□□□□ -0.02
PTCH1-227ENST00000553256 ZNF430Q9H8G1 570 aaPredicted RBP14.9□□□□□ -0.02
PTCH1-227ENST00000553256 SCPEP1Q9HB40 452 aa14.9□□□□□ -0.02
PTCH1-227ENST00000553256 TAS2R8Q9NYW2 309 aa14.9□□□□□ -0.02
PTCH1-227ENST00000553256 A0A1B0GW64 132 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 H3BUA1 57 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 RBFOX2O43251 390 aaKnown RBP eCLIP14.89□□□□□ -0.03
PTCH1-227ENST00000553256 RAMP3O60896 148 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 LGALS1P09382 135 aaKnown RBP14.89□□□□□ -0.03
PTCH1-227ENST00000553256 CBX3Q13185 183 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 VMA21Q3ZAQ7 101 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 OR2B11Q5JQS5 317 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 GPR141Q7Z602 305 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 POC5Q8NA72 575 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 OR1N2Q8NGR9 330 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 MCRIP2Q9BUT9 160 aaKnown RBP14.89□□□□□ -0.03
PTCH1-227ENST00000553256 SCOCQ9UIL1 159 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 PRELID3BQ9Y3B1 194 aa14.89□□□□□ -0.03
PTCH1-227ENST00000553256 E7EUB6 86 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 K7EIL1 84 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 HOXD3P31249 432 aaPredicted RBP14.88□□□□□ -0.03
PTCH1-227ENST00000553256 POU2AF1Q16633 256 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 VKORC1L1Q8N0U8 176 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 OR4S2Q8NH73 311 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 TMEM167AQ8TBQ9 72 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 ABHD5Q8WTS1 349 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 TCTEX1D2Q8WW35 142 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 SRSF12Q8WXF0 261 aaKnown RBP14.88□□□□□ -0.03
PTCH1-227ENST00000553256 OR5B12Q96R08 314 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 SLC5A7Q9GZV3 580 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 FXYD6Q9H0Q3 95 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 SLA2Q9H6Q3 261 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 IFT46Q9NQC8 304 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 EHFQ9NZC4 300 aa14.88□□□□□ -0.03
PTCH1-227ENST00000553256 MSGN1A6NI15 193 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 SULT1C2O00338 296 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 TNFSF12O43508 249 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 TPPPO94811 219 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 PMP2P02689 132 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 ZNF616Q08AN1 781 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 C10orf55Q5SWW7 151 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 ADAD2Q8NCV1 583 aaKnown RBP14.87□□□□□ -0.03
PTCH1-227ENST00000553256 OR5T1Q8NG75 326 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 MS4A10Q96PG2 267 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 ABHD1Q96SE0 405 aa14.87□□□□□ -0.03
PTCH1-227ENST00000553256 MRPS7Q9Y2R9 242 aaKnown RBP14.87□□□□□ -0.03
PTCH1-227ENST00000553256 WI2-2373I1.2A0A1W2PRP0 233 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 TEX22C9J3V5 150 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 CNIH1O95406 144 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 HRH1P35367 487 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 TAS2R46P59540 309 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 KLK9Q2XQG4 91 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 SNX29P2Q8IUI4 249 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 MMD2Q8IY49 270 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 DYNC2LI1Q8TCX1 351 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 AP3S1Q92572 193 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 BCL7BQ9BQE9 202 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 ZNF2Q9BSG1 426 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-227ENST00000553256 TINAGL1Q9GZM7 467 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-227ENST00000553256 KLK9Q9UKQ9 250 aa14.86□□□□□ -0.03
PTCH1-227ENST00000553256 IGHV4OR15-8A0A075B7B6 117 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 A0A087WW49 117 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 CGB1A6NKQ9 187 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 KBTBD11O94819 623 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 OR2A4O95047 310 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 OR8U8P0C7N1 319 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 HLA-DMAP28067 261 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 KIR2DS2P43631 304 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 TMBIM6P55061 237 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 FXYD4P59646 89 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 ZNF45Q02386 682 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 TNXAQ16473 311 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 SPAG16Q8N0X2 631 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 OR5H2Q8NGV7 314 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 OR2A7Q96R45 310 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 GPR61Q9BZJ8 451 aa14.85□□□□□ -0.03
PTCH1-227ENST00000553256 TRBV9A0A0B4J1U6 114 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 SMIM31A0A1B0GVY4 71 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 CTDSP2O14595 271 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 PGLYRP1O75594 196 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-227ENST00000553256 IGHV3-11P01762 117 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 RCVRNP35243 200 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 RPL5P46777 297 aaKnown RBP14.84□□□□□ -0.03
PTCH1-227ENST00000553256 TPPP2P59282 170 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 VAX1Q5SQQ9 334 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 AADACL3Q5VUY0 350 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 MZT2AQ6P582 158 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 TMEM17Q86X19 198 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 CLVS1Q8IUQ0 354 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-227ENST00000553256 TTC9CQ8N5M4 171 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 RAB2BQ8WUD1 216 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 DCUN1D4Q92564 292 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 DLX4Q92988 240 aaPredicted RBP14.84□□□□□ -0.03
PTCH1-227ENST00000553256 BET1LQ9NYM9 111 aa14.84□□□□□ -0.03
PTCH1-227ENST00000553256 TRGV3P03979 118 aa14.83□□□□□ -0.04
PTCH1-227ENST00000553256 ZNF735P0CB33 412 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms