RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 CST9LQ9H4G1 147 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 DKKL1Q9UK85 242 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 LSM5Q9Y4Y9 91 aaKnown RBP0.76□□□□□ -2.29
USP44-207ENST00000552237 POLR3HQ9Y535 204 aaPredicted RBP0.76□□□□□ -2.29
USP44-207ENST00000552237 TIMM9Q9Y5J7 89 aa0.76□□□□□ -2.29
USP44-207ENST00000552237 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
USP44-207ENST00000552237 NUP160Q12769 1436 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 PIK3R4Q99570 1358 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 LINC00854A0A1B0GVQ3 168 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 DISC1C4P0D8 188 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 LRRN3E7EW58 273 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 MT-CO2P00403 227 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 CRPP02741 224 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 ORM1P02763 201 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 PSMB8P28062 276 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 AKR1C3P42330 323 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 CD151P48509 253 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 FXYD7P58549 80 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 SKP1P63208 163 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 PRB3Q04118 309 aaPredicted RBP0.75□□□□□ -2.29
USP44-207ENST00000552237 SMAGPQ0VAQ4 97 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 TMEM267Q0VDI3 215 aaPredicted RBP0.75□□□□□ -2.29
USP44-207ENST00000552237 FABP9Q0Z7S8 132 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 COTL1Q14019 142 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 CDK10Q15131 360 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 HLA-DRB5Q30154 266 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 SLC36A2Q495M3 483 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 FAM78BQ5VT40 261 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 CST9Q5W186 159 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 DNM1P34Q6PK57 102 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 FAM151BQ6UXP7 276 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 RASSF6Q6ZTQ3 369 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 KTN1-AS1Q86SY8 53 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 MED12LQ86YW9 2145 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 C1orf174Q8IYL3 243 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 BLIDQ8IZY5 108 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 TMEM86AQ8N2M4 240 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 Q8N402 240 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 OR7G1Q8NGA0 311 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 OR5L1Q8NGL2 311 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 MCFD2Q8NI22 146 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 PIGXQ8TBF5 258 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 SMCR5Q8TEV8 140 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 Q8WTZ3 238 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 ANKRD36BP1Q96IX9 119 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 ZNF514Q96K75 400 aaPredicted RBP0.75□□□□□ -2.29
USP44-207ENST00000552237 KCTD7Q96MP8 289 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 MROQ9BYG7 248 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 VCX3BQ9H321 246 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 EMC3Q9P0I2 261 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 HDGFL3Q9Y3E1 203 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 DSCAMO60469 2012 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 PTPRBP23467 1997 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 COL6A6A6NMZ7 2263 aa0.75□□□□□ -2.29
USP44-207ENST00000552237 SDK1Q7Z5N4 2213 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 NAV1Q8NEY1 1877 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 KIF13BQ9NQT8 1826 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 IGKV3-7A0A075B6H7 116 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 FUOMA2VDF0 154 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 C21orf140B9A014 251 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 GOLGA8KD6RF30 607 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 M0R036 132 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 KCNK1O00180 336 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 NOS1APO75052 506 aaPredicted RBP0.74□□□□□ -2.29
USP44-207ENST00000552237 DEXIO95424 95 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 TNNC2P02585 160 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 HLA-DQB2P05538 268 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 FAM228BP0C875 321 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 KCNE1P15382 129 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 UGT2B7P16662 529 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 NFYAP23511 347 aaPredicted RBP0.74□□□□□ -2.29
USP44-207ENST00000552237 CCR7P32248 378 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 GABRA2P47869 451 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 RBM11P57052 281 aaKnown RBP0.74□□□□□ -2.29
USP44-207ENST00000552237 TMEM33P57088 247 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 FABP5Q01469 135 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 GNA13Q14344 377 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 CLEC6AQ6EIG7 209 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 LCN8Q6JVE9 175 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 LYZL1Q6UWQ5 148 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 UNQ6190/PRO20217Q6UXQ8 127 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 ZNF705AQ6ZN79 300 aaPredicted RBP0.74□□□□□ -2.29
USP44-207ENST00000552237 FUNDC1Q8IVP5 155 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 CD302Q8IX05 232 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 TMEM251Q8N6I4 163 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 UBL4BQ8N7F7 174 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 MNS1Q8NEH6 495 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 DDI1Q8WTU0 396 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 NMNAT3Q96T66 252 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 TMEM109Q9BVC6 243 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 TTTY13Q9BZ97 58 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 COMMD5Q9GZQ3 224 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 XAGE1AQ9HD64 81 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 POLR1DQ9Y2S0 133 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 C15orf41Q9Y2V0 281 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 ATP6V1DQ9Y5K8 247 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 TENM3Q9P273 2699 aa0.74□□□□□ -2.29
USP44-207ENST00000552237 A0A1W2PP64 1363 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 HEATR5AQ86XA9 2040 aa0.73□□□□□ -2.29
USP44-207ENST00000552237 IQCF5A8MTL0 148 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms