RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 DNAJC12Q9UKB3 198 aa4.57□□□□□ -1.68
VPS29-210ENST00000552130 ATRNO75882 1429 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 NOS1P29475 1434 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 DOCK5Q9H7D0 1870 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 A0A087X002 238 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 LOC102724200A0A096LPH7 203 aaPredicted RBP4.56□□□□□ -1.68
VPS29-210ENST00000552130 A0A0J9YY10 115 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 A0A1B0GX78 115 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 C9JQL5 133 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 F6UZH7 168 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 SOCS3O14543 225 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 OR7C2O60412 319 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 OR2H2O95918 312 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 CXorf1O96002 111 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 OPN1SWP03999 348 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 CDKN2AP42771 156 aaKnown RBP4.56□□□□□ -1.68
VPS29-210ENST00000552130 CA7P43166 264 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 ZNF83P51522 516 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 AKR1D1P51857 326 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 NCS1P62166 190 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 KRTAP27-1Q3LI81 207 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 ZNF876PQ49A33 203 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 OCIAD2Q56VL3 154 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 LYPD2Q6UXB3 125 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 Q6ZS49 121 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 PDZD9Q8IXQ8 264 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 TCTE3Q8IZS6 198 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 OR8I2Q8N0Y5 310 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 FAM57AQ8TBR7 257 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 LYZL4Q96KX0 146 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 GGTLC1Q9BX51 225 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 HEXA-AS1Q9H8Q6 139 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 CA10Q9NS85 328 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 TMEM38BQ9NVV0 291 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 TAC3Q9UHF0 121 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 NAT8BQ9UHF3 227 aa4.56□□□□□ -1.68
VPS29-210ENST00000552130 AMMECR1Q9Y4X0 333 aaPredicted RBP4.56□□□□□ -1.68
VPS29-210ENST00000552130 VPS8Q8N3P4 1428 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 PDS5BQ9NTI5 1447 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 IGLV7-46A0A075B6I9 117 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 IGKV6-21A0A0C4DH24 114 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 A0A1B0GW64 132 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 J3QRK9 145 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 LST1O00453 97 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 LMX1BO60663 402 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 GGCTO75223 188 aaKnown RBP4.55□□□□□ -1.68
VPS29-210ENST00000552130 IGLV3-27P01718 113 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 CCR2P41597 374 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 RPL35P42766 123 aaKnown RBP4.55□□□□□ -1.68
VPS29-210ENST00000552130 LPAR6P43657 344 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 NANOS2P60321 138 aaKnown RBP4.55□□□□□ -1.68
VPS29-210ENST00000552130 DNLZQ5SXM8 178 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 RASL11AQ6T310 242 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 SCIMPQ6UWF3 145 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 C9orf47Q6ZRZ4 202 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 SLC22A24Q8N4F4 322 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 OR51T1Q8NGJ9 327 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 OR5H2Q8NGV7 314 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 OR5W2Q8NH69 310 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 ZNF721Q8TF20 911 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 RTN4IP1Q8WWV3 396 aaPredicted RBP4.55□□□□□ -1.68
VPS29-210ENST00000552130 ISOC1Q96CN7 298 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 IFI27L2Q9H2X8 130 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 C11orf68Q9H3H3 251 aaKnown RBP4.55□□□□□ -1.68
VPS29-210ENST00000552130 NIT2Q9NQR4 276 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 NUFIP1Q9UHK0 495 aaKnown RBP4.55□□□□□ -1.68
VPS29-210ENST00000552130 ZNF230Q9UIE0 474 aaPredicted RBP4.55□□□□□ -1.68
VPS29-210ENST00000552130 AK3Q9UIJ7 227 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 DOCK6Q96HP0 2047 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 PPIP5K1Q6PFW1 1433 aa4.55□□□□□ -1.68
VPS29-210ENST00000552130 A8MUN3 132 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 FABP5P3A8MUU1 101 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 COX7A2LO14548 114 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 OVOL1O14753 267 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 SERF1AO75920 110 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 LTAP01374 205 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 BCL2P10415 239 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 S100A11P31949 105 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 OPRK1P41145 380 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 DAPP51397 102 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 FKBP1AP62942 108 aaKnown RBP4.54□□□□□ -1.68
VPS29-210ENST00000552130 BIKQ13323 160 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 LYRM7Q5U5X0 104 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 GLT8D1Q68CQ7 371 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 WDR59Q6PJI9 974 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 CROCCP2Q86T23 111 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 WDR86Q86TI4 376 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 PDPNQ86YL7 162 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 OR10D4PQ8NGN7 298 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 LMO3Q8TAP4 145 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 OR2J1Q9GZK6 312 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 YIPF3Q9GZM5 350 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 OR8D2Q9GZM6 311 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 IMUPQ9GZP8 106 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 SND1-IT1Q9HBX3 110 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 ZNF492Q9P255 531 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 DEC1Q9P2X7 70 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 SIGLEC1Q9BZZ2 1709 aa4.54□□□□□ -1.68
VPS29-210ENST00000552130 UHRF1BP1LA0JNW5 1464 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms