RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 BATF2Q8N1L9 274 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 CENPSQ8N2Z9 138 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 OR51L1Q8NGJ5 315 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 OR8D4Q8NGM9 314 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 OR6K6Q8NGW6 343 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 OR6N2Q8NGY6 317 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 RFESDQ8TAC1 157 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ASB17Q8WXJ9 295 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM190Q8WZ59 177 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ARL11Q969Q4 196 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 BORCS8Q96FH0 119 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 YPEL2Q96QA6 119 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ATP6V0BQ99437 205 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 SH3GL1Q99961 368 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 AGMATQ9BSE5 352 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 CHRDL1Q9BU40 450 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM109Q9BVC6 243 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF436Q9C0F3 470 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 YIPF3Q9GZM5 350 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 NSRP1Q9H0G5 558 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 IFI27L2Q9H2X8 130 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 FNDC4Q9H6D8 234 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 DAZ1Q9NQZ3 744 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 INTS9Q9NV88 658 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 FAM118AQ9NWS6 357 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 SMPD3Q9NY59 655 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 CCDC167Q9P0B6 97 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 METTL1Q9UBP6 276 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 HSPB7Q9UBY9 170 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 JPT1Q9UK76 154 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 GSTK1Q9Y2Q3 226 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 V9GYQ6 96 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 A0A087WTM6 91 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 FAM230AA0A1W2PPH8 454 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM30CPA0ZSE6 113 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 SMIM9A6NGZ8 99 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 RIIAD1A6NNX1 92 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 K7EP13 123 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 DEGS1O15121 323 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 ARPC2O15144 300 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 RS1O15537 224 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 SPINT2O43291 252 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 SELENOFO60613 162 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CCDC22O60826 627 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 SPAG7O75391 227 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CA11O75493 328 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 IFNA5P01569 189 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 IGLV2-23P01705 113 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 MT-ND4P03905 459 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 IGKV1-16P04430 117 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CD5P06127 495 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 SPART-AS1P0CW21 52 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 SAA2P0DJI9 122 aaPredicted RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CT45A6P0DMU7 189 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CT45A5P0DMU8 189 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CT45A7P0DMV0 189 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF3P17036 446 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 C4BPBP20851 252 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 PRKACBP22694 351 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 GNRHRP30968 328 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CAPGP40121 348 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 YAP1P46937 504 aaKnown RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 RIDAP52758 137 aaKnown RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CCL18P55774 89 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 MTCP1P56278 107 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 SMIM11AP58511 58 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 RPL24P83731 157 aaKnown RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CBX1P83916 185 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 ATP5G2Q06055 141 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CKAP4Q07065 602 aaKnown RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 USF2Q15853 346 aaPredicted RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 C15orf32Q32M92 178 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 PAN3Q58A45 887 aaKnown RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 SLC35D3Q5M8T2 416 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 LAMTOR1Q6IAA8 161 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 UNQ9165/PRO28630Q6UXU0 137 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF705AQ6ZN79 300 aaPredicted RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CYP4Z1Q86W10 505 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 ERI1Q8IV48 349 aaKnown RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 APRG1Q8IVJ8 170 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CPOQ8IVL8 374 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 TTC9CQ8N5M4 171 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 PXT1Q8NFP0 134 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 OR5T1Q8NG75 326 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 OR2T33Q8NG76 320 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 OR2T12Q8NG77 320 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 OR5B3Q8NH48 314 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 GRPEL2Q8TAA5 225 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 THEM6Q8WUY1 208 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 GIMAP1Q8WWP7 306 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 RNF125Q96EQ8 232 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 TSNAXQ99598 290 aaKnown RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 CCDC28BQ9BUN5 200 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 MROQ9BYG7 248 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 ROPN1BQ9BZX4 212 aaPredicted RBP1.53□□□□□ -2.16
PTCH1-223ENST00000551623 Q9H8V8 135 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM14BQ9NUH8 114 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 IL36GQ9NZH8 169 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 GNG12Q9UBI6 72 aa1.53□□□□□ -2.16
PTCH1-223ENST00000551623 UBQLN2Q9UHD9 624 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms