RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 TMA16Q96EY4 203 aaKnown RBP0.72□□□□□ -2.29
GPN3-209ENST00000551079 TREM1Q9NP99 234 aa0.72□□□□□ -2.29
GPN3-209ENST00000551079 TP53TG1Q9Y2A0 90 aa0.72□□□□□ -2.29
GPN3-209ENST00000551079 RBM7Q9Y580 266 aaKnown RBP0.72□□□□□ -2.29
GPN3-209ENST00000551079 TIMM9Q9Y5J7 89 aa0.72□□□□□ -2.29
GPN3-209ENST00000551079 PTPRSQ13332 1948 aa0.72□□□□□ -2.29
GPN3-209ENST00000551079 INTS1Q8N201 2190 aaKnown RBP0.72□□□□□ -2.29
GPN3-209ENST00000551079 BRWD1Q9NSI6 2320 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 TEX50A0A1B0GTY4 177 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 TMEM213A2RRL7 107 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 H7C2G1 150 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 STX10O60499 249 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 NEMFO60524 1076 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 RPSAP08865 295 aaKnown RBP0.71□□□□□ -2.3
GPN3-209ENST00000551079 CXCL2P19875 107 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 MOGQ16653 247 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 Q1T7F1 81 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 PLPPR5Q32ZL2 321 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 SLC36A1Q7Z2H8 476 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 RPS19BP1Q86WX3 136 aaKnown RBP0.71□□□□□ -2.3
GPN3-209ENST00000551079 GPHB5Q86YW7 130 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 RIBC1Q8N443 379 aaPredicted RBP0.71□□□□□ -2.3
GPN3-209ENST00000551079 IMMP2LQ96T52 175 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 ADAT1Q9BUB4 502 aaKnown RBP0.71□□□□□ -2.3
GPN3-209ENST00000551079 GREB1Q4ZG55 1949 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 NUP160Q12769 1436 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 SIPA1L1O43166 1804 aa0.71□□□□□ -2.3
GPN3-209ENST00000551079 TRAV7A0A075B6U4 112 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 A0A1B0GW54 56 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 TRAPPC13A5PLN9 417 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 FTCDNL1E5RQL4 147 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 ATP6V1G2O95670 118 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 HLA-DQB2P05538 268 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 LGALS1P09382 135 aaKnown RBP0.7□□□□□ -2.3
GPN3-209ENST00000551079 CXCL3P19876 107 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 ALDH3A1P30838 453 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 EVX1P49640 407 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 AQP4P55087 323 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 RPS24P62847 133 aaKnown RBP0.7□□□□□ -2.3
GPN3-209ENST00000551079 CTAG1AP78358 180 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 CDK5R1Q15078 307 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 SLC37A2Q8TED4 501 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 BBS2Q9BXC9 721 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 SLC22A4Q9H015 551 aa0.7□□□□□ -2.3
GPN3-209ENST00000551079 NSRP1Q9H0G5 558 aaKnown RBP0.7□□□□□ -2.3
GPN3-209ENST00000551079 ZNHIT6Q9NWK9 470 aaKnown RBP0.7□□□□□ -2.3
GPN3-209ENST00000551079 A0A0D9SEW6 157 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 C5orf49A4QMS7 147 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 CREBL2O60519 120 aaPredicted RBP0.69□□□□□ -2.3
GPN3-209ENST00000551079 SCN2BO60939 215 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 CLDN12P56749 244 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 HIST1H4AP62805 103 aaKnown RBP0.69□□□□□ -2.3
GPN3-209ENST00000551079 HLA-DRB3P79483 266 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 AKR1C1Q04828 323 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 PMS2P3Q13401 168 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 ELOBQ15370 118 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 ANGPT1Q15389 498 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 ARHGAP11BQ3KRB8 267 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 SPATA24Q86W54 205 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 TMEM109Q9BVC6 243 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 TIPINQ9BVW5 301 aa0.69□□□□□ -2.3
GPN3-209ENST00000551079 SCAF11Q99590 1463 aaKnown RBP0.68□□□□□ -2.3
GPN3-209ENST00000551079 TMED7-TICAM2A0A0A6YYA0 188 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 TRAV38-1A0A0B4J264 116 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 H3BT86 120 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 IL6P05231 212 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 RPL28P46779 137 aaKnown RBP0.68□□□□□ -2.3
GPN3-209ENST00000551079 RP1P56715 2156 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 RAB14P61106 215 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 DNM1P34Q6PK57 102 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 RASSF6Q6ZTQ3 369 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 DCXRQ7Z4W1 244 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 DYNAPQ8N1N2 210 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 Q8N2B8 174 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 RAB2BQ8WUD1 216 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 CCL13Q99616 98 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 HES4Q9HCC6 221 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 MED12LQ86YW9 2145 aa0.68□□□□□ -2.3
GPN3-209ENST00000551079 SMARCA4P51532 1647 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 TECTAO75443 2155 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 IGKV2D-26A0A0A0MRZ7 120 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 OR51F1A6NGY5 319 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 IQCF5A8MTL0 148 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 ORC5O43913 435 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 APOMO95445 188 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 DEFA4P12838 97 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 SLCO1A2P46721 670 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 LRRC75BQ2VPJ9 315 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 ACSM3Q53FZ2 586 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 SAPCD1Q5SSQ6 148 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 FAM173BQ6P4H8 233 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 FAM19A5Q7Z5A7 132 aaPredicted RBP0.67□□□□□ -2.3
GPN3-209ENST00000551079 SYCE1Q8N0S2 351 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 TMEM86AQ8N2M4 240 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 RPP25LQ8N5L8 163 aaKnown RBP0.67□□□□□ -2.3
GPN3-209ENST00000551079 C15orf53Q8NAA6 179 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 ASB13Q8WXK3 278 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 ANKRD36BP1Q96IX9 119 aa0.67□□□□□ -2.3
GPN3-209ENST00000551079 PACRGQ96M98 296 aaPredicted RBP0.67□□□□□ -2.3
GPN3-209ENST00000551079 CHST6Q9GZX3 395 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms