RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 TEX13DA0A0J9YY54 714 aaPredicted RBP10.72□□□□□ -0.69
ERBB3-215ENST00000550828 BTBD17A6NE02 478 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 FAM181BA6NEQ2 426 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 SHOXO15266 292 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 NBR2O15453 112 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 SLC25A17O43808 307 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 SAA1P0DJI8 122 aaPredicted RBP10.72□□□□□ -0.69
ERBB3-215ENST00000550828 RPA2P15927 270 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 SSBP2P81877 361 aaPredicted RBP10.72□□□□□ -0.69
ERBB3-215ENST00000550828 RELBQ01201 579 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 MMDQ15546 238 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 ANKRD55Q3KP44 614 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 TMEM128Q5BJH2 165 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 OR52B4Q8NGK2 314 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 OSR1Q8TAX0 266 aaPredicted RBP10.72□□□□□ -0.69
ERBB3-215ENST00000550828 SEC22CQ9BRL7 303 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 FBXL15Q9H469 300 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 PLEKHA2Q9HB19 425 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 FAM212BQ9NTI7 297 aaPredicted RBP10.72□□□□□ -0.69
ERBB3-215ENST00000550828 PITPNC1Q9UKF7 332 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 MOB4Q9Y3A3 225 aa10.72□□□□□ -0.69
ERBB3-215ENST00000550828 A0A0B4J293 547 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 A0A0G2JRQ6 117 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 C9orf170A2RU37 121 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 FCN1O00602 326 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 RRHO14718 337 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 SFT2D2O95562 160 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 PTTG1O95997 202 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 IGKV1-5P01602 117 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 OR4E1P0C645 316 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 P0C879 139 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 S100GP29377 79 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 BLCAPP62952 87 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 PJVKQ0ZLH3 352 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 DHRS2Q13268 280 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 POU2AF1Q16633 256 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 IZUMO4Q1ZYL8 232 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 C5orf64Q2M2E5 130 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 C11orf88Q6PI97 169 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 LIAT1Q6ZQX7 453 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 SGPP2Q8IWX5 399 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 PUSL1Q8N0Z8 303 aaKnown RBP10.71□□□□□ -0.69
ERBB3-215ENST00000550828 TCTEX1D1Q8N7M0 179 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 RNF5Q99942 180 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 HSPB9Q9BQS6 159 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 MARVELD1Q9BSK0 173 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 TMEM222Q9H0R3 208 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 COMMD9Q9P000 198 aa10.71□□□□□ -0.69
ERBB3-215ENST00000550828 TRAV3A0A0B4J244 114 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 NCBP2LA6PVI3 153 aaKnown RBP10.7□□□□□ -0.7
ERBB3-215ENST00000550828 SPDEFO95238 335 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 CDS2O95674 445 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 HPRT1P00492 218 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 IL6RP08887 468 aaPredicted RBP10.7□□□□□ -0.7
ERBB3-215ENST00000550828 VAMP1P23763 118 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 G6PCP35575 357 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 TAS2R31P59538 309 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 UBE2MP61081 183 aaKnown RBP10.7□□□□□ -0.7
ERBB3-215ENST00000550828 UBE2KP61086 200 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 NDPQ00604 133 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 SSX9Q7RTT3 188 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 C16orf82Q7Z2V1 217 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 SELENOHQ8IZQ5 122 aaKnown RBP10.7□□□□□ -0.7
ERBB3-215ENST00000550828 OR8H1Q8NGG4 311 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 CD300LFQ8TDQ1 290 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 ZFAND2BQ8WV99 257 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 R3HDM4Q96D70 268 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 SEC22AQ96IW7 307 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 RHOVQ96L33 236 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 JMJD8Q96S16 334 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 TSNAXQ99598 290 aaKnown RBP10.7□□□□□ -0.7
ERBB3-215ENST00000550828 ALX4Q9H161 411 aaPredicted RBP10.7□□□□□ -0.7
ERBB3-215ENST00000550828 ZNF702PQ9H963 129 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 C1RLQ9NZP8 487 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 METTL1Q9UBP6 276 aaKnown RBP10.7□□□□□ -0.7
ERBB3-215ENST00000550828 SIGLEC9Q9Y336 463 aa10.7□□□□□ -0.7
ERBB3-215ENST00000550828 LINC01548A6NM66 108 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 FGF16O43320 207 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 SERPINE2P07093 398 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 OR9G9P0C7N8 305 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 MYOD1P15172 320 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 LGALS7P47929 136 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 CBX3Q13185 183 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 OXA1LQ15070 435 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 TMEM95Q3KNT9 176 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 OR4A47Q6IF82 309 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 LIN54Q6MZP7 749 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 PLET1Q6UQ28 207 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 Q6ZSV7 163 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 LYG2Q86SG7 212 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 CASTOR1Q8WTX7 329 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 TMEM56Q96MV1 263 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 TMEM56-RWDD3S4R434 201 aa10.69□□□□□ -0.7
ERBB3-215ENST00000550828 DBX1A6NMT0 343 aa10.68□□□□□ -0.7
ERBB3-215ENST00000550828 MARCH11A6NNE9 402 aa10.68□□□□□ -0.7
ERBB3-215ENST00000550828 INMT-MINDY4F8WBC2 141 aa10.68□□□□□ -0.7
ERBB3-215ENST00000550828 B3GALNT1O75752 331 aa10.68□□□□□ -0.7
ERBB3-215ENST00000550828 KRASP01116 189 aa10.68□□□□□ -0.7
ERBB3-215ENST00000550828 HLA-AP01891 365 aaKnown RBP10.68□□□□□ -0.7
ERBB3-215ENST00000550828 IL5P05113 134 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms