RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 ZNF785A8K8V0 405 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 SAA1P0DJI8 122 aaPredicted RBP16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 MAP2K4P45985 399 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 OR10A3P58181 314 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 CDK10Q15131 360 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 CD300EQ496F6 205 aaPredicted RBP16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 TTC9CQ8N5M4 171 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 SPIN2AQ99865 258 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 SPIN2BQ9BPZ2 258 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 PLEKHA3Q9HB20 300 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 RETNQ9HD89 108 aa16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 NKX1-2Q9UD57 310 aaPredicted RBP16.4■□□□□ 0.22
SMARCC2-210ENST00000550519 PDCD5O14737 125 aa16.39■□□□□ 0.21
SMARCC2-210ENST00000550519 CRHBPP24387 322 aa16.39■□□□□ 0.21
SMARCC2-210ENST00000550519 CD81P60033 236 aa16.39■□□□□ 0.21
SMARCC2-210ENST00000550519 NECAP1Q8NC96 275 aa16.39■□□□□ 0.21
SMARCC2-210ENST00000550519 NEURL2Q9BR09 285 aa16.39■□□□□ 0.21
SMARCC2-210ENST00000550519 DMRT1Q9Y5R6 373 aa16.39■□□□□ 0.21
SMARCC2-210ENST00000550519 CREBL2O60519 120 aaPredicted RBP16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 TUSC2O75896 110 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 ACTL6BO94805 426 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 CD7P09564 240 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 TALDO1P37837 337 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 ARFRP1Q13795 201 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 SSX1Q16384 188 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 DEFB114Q30KQ6 69 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 C10orf55Q5SWW7 151 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 MMD2Q8IY49 270 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 NRG4Q8WWG1 115 aa16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 KCTD12Q96CX2 325 aaKnown RBP16.38■□□□□ 0.21
SMARCC2-210ENST00000550519 METTL21EPA6NDL7 271 aa16.37■□□□□ 0.21
SMARCC2-210ENST00000550519 TPPPO94811 219 aa16.37■□□□□ 0.21
SMARCC2-210ENST00000550519 DTYMKP23919 212 aa16.37■□□□□ 0.21
SMARCC2-210ENST00000550519 ZNF645Q8N7E2 425 aa16.37■□□□□ 0.21
SMARCC2-210ENST00000550519 IL17DQ8TAD2 202 aa16.37■□□□□ 0.21
SMARCC2-210ENST00000550519 SLC2A8Q9NY64 477 aa16.37■□□□□ 0.21
SMARCC2-210ENST00000550519 ELF5Q9UKW6 265 aaPredicted RBP16.37■□□□□ 0.21
SMARCC2-210ENST00000550519 HYDINQ4G0P3 5121 aa16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 RBMY1BA6NDE4 496 aaKnown RBP16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 RBMY1EA6NEQ0 496 aaKnown RBP16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 FCGR3BO75015 233 aa16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 RBMY1DP0C7P1 496 aaKnown RBP16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 KIR2DS2P43631 304 aa16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 C15orf32Q32M92 178 aa16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 FAM209BQ5JX69 171 aa16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 SLC25A42Q86VD7 318 aa16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 DEFB125Q8N687 156 aa16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 FAM110AQ9BQ89 295 aa16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 ZC4H2Q9NQZ6 224 aa16.36■□□□□ 0.21
SMARCC2-210ENST00000550519 J3QRK9 145 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 OR2J3O76001 311 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 HLA-DQB1P01920 261 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 RPL30P62888 115 aaKnown RBP16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 ARL6IP1Q15041 203 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 TBCEQ15813 527 aaPredicted RBP16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 KCTD9Q7L273 389 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 DYNLRB2Q8TF09 96 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 DCUN1D5Q9BTE7 237 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 ZNF257Q9Y2Q1 563 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 RBMX2Q9Y388 322 aaKnown RBP16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 PRELID3BQ9Y3B1 194 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 OR2W1Q9Y3N9 320 aa16.35■□□□□ 0.21
SMARCC2-210ENST00000550519 C2orf70A6NJV1 201 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 TEX22C9J3V5 150 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 PPP5D1E7EU14 171 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 LGALS9O00182 355 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 GGCTO75223 188 aaKnown RBP16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 JTBO76095 146 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 IGLV2-14P01704 120 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 CTXN2P0C2S0 81 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 FOLR2P14207 255 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 RAB3BP20337 219 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 EDN2P20800 178 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 MYL9P24844 172 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 ZNF367Q7RTV3 350 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 NR2C2APQ86WQ0 139 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 WFDC10AQ9H1F0 79 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 OR51E2Q9H255 320 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 NDUFB11Q9NX14 153 aa16.34■□□□□ 0.21
SMARCC2-210ENST00000550519 TRDV1A0A1B0GX56 115 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 HMX3A6NHT5 357 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 OR11H12B2RN74 326 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 ANKRD65E5RJM6 399 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 SLC22A5O76082 557 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 HLA-AP01891 365 aaKnown RBP16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 CD36P16671 472 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 NFYAP23511 347 aaPredicted RBP16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 CDNFQ49AH0 187 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 VKORC1L1Q8N0U8 176 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 ST6GALNAC5Q9BVH7 336 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 ATG5Q9H1Y0 275 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 SRD5A3Q9H8P0 318 aa16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 TECRQ9NZ01 308 aaKnown RBP16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 MRPS7Q9Y2R9 242 aaKnown RBP16.33■□□□□ 0.2
SMARCC2-210ENST00000550519 NPIPB5A8MRT5 1133 aa16.32■□□□□ 0.2
SMARCC2-210ENST00000550519 OR2C1O95371 312 aa16.32■□□□□ 0.2
SMARCC2-210ENST00000550519 IL6RP08887 468 aaPredicted RBP16.32■□□□□ 0.2
SMARCC2-210ENST00000550519 OR2B11Q5JQS5 317 aa16.32■□□□□ 0.2
SMARCC2-210ENST00000550519 C19orf35Q6ZS72 473 aa16.32■□□□□ 0.2
SMARCC2-210ENST00000550519 GPHB5Q86YW7 130 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms