RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 C19orf71A6NCJ1 209 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 C17orf98A8MV24 154 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 OR11H12B2RN74 326 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 UBFD1O14562 309 aaKnown RBP2.04□□□□□ -2.08
SNRPF-202ENST00000549580 FADS1O60427 444 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 CCL3P10147 92 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 KCNE1P15382 129 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 S100A5P33763 92 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 DCCP43146 1447 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 SERPINB10P48595 397 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 ZNF140P52738 457 aaPredicted RBP2.04□□□□□ -2.08
SNRPF-202ENST00000549580 RWDD2BP57060 319 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 FKBP1AP62942 108 aaKnown RBP2.04□□□□□ -2.08
SNRPF-202ENST00000549580 ALKAL1Q6UXT8 129 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 TCF24Q7RTU0 167 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 GPHB5Q86YW7 130 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 MSRB3Q8IXL7 192 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 OR10D4PQ8NGN7 298 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 OR11H2Q8NH07 326 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 RPS4Y2Q8TD47 263 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 ROPN1LQ96C74 230 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 SFRP2Q96HF1 295 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 CAPZA3Q96KX2 299 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 CNBD2Q96M20 576 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 ULBP3Q9BZM4 244 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 TMEM222Q9H0R3 208 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 C16orf95Q9H693 158 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 TRPM3Q9HCF6 1732 aaPredicted RBP2.04□□□□□ -2.08
SNRPF-202ENST00000549580 TXNL4BQ9NX01 149 aaKnown RBP2.04□□□□□ -2.08
SNRPF-202ENST00000549580 MRPL16Q9NX20 251 aaKnown RBP2.04□□□□□ -2.08
SNRPF-202ENST00000549580 GLTPQ9NZD2 209 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 TAAR3PQ9P1P4 343 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 FBXO5Q9UKT4 447 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 ARL2BPQ9Y2Y0 163 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 KLK5Q9Y337 293 aaPredicted RBP2.04□□□□□ -2.08
SNRPF-202ENST00000549580 COQ4Q9Y3A0 265 aa2.04□□□□□ -2.08
SNRPF-202ENST00000549580 CHD5Q8TDI0 1954 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 DICER1Q9UPY3 1922 aaKnown RBP2.03□□□□□ -2.08
SNRPF-202ENST00000549580 SHANK3Q9BYB0 1731 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 PQLC2LA1A4F0 135 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 INMT-MINDY4F8WBC2 141 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 SOD1P00441 154 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 IGHV1-69P01742 117 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 FGF6P10767 208 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 RPL27AP46776 148 aaKnown RBP2.03□□□□□ -2.08
SNRPF-202ENST00000549580 GABRA2P47869 451 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 TAS2R30P59541 319 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 POLR2GP62487 172 aaKnown RBP eCLIP2.03□□□□□ -2.08
SNRPF-202ENST00000549580 TNFAIP6P98066 277 aaPredicted RBP2.03□□□□□ -2.08
SNRPF-202ENST00000549580 FAM229BQ4G0N7 80 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 C20orf196Q8IYI0 205 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 OR2T4Q8NH00 348 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 SGMS2Q8NHU3 365 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 DGCR14Q96DF8 476 aaKnown RBP2.03□□□□□ -2.08
SNRPF-202ENST00000549580 PPP1R2P1Q96PQ5 205 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 TLNRD1Q9H1K6 362 aa2.03□□□□□ -2.08
SNRPF-202ENST00000549580 NLRC5Q86WI3 1866 aa2.03□□□□□ -2.09
SNRPF-202ENST00000549580 A0A087WUU8 490 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 OR5K4A6NMS3 321 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 KNCNA6PVL3 124 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 H3BPC8 53 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 LST1O00453 97 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 BHLHE40O14503 412 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 NSA2O95478 260 aaKnown RBP2.02□□□□□ -2.09
SNRPF-202ENST00000549580 CPMP14384 443 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 LGALS3P17931 250 aaKnown RBP2.02□□□□□ -2.09
SNRPF-202ENST00000549580 CAPZBP47756 277 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 GZMMP51124 257 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 ARF6P62330 175 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 LGALS9BQ3B8N2 356 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 TMEM97Q5BJF2 176 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 TNFAIP8L3Q5GJ75 292 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 GLT8D1Q68CQ7 371 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 LGALS9CQ6DKI2 356 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 HCP5Q6MZN7 132 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 TMPPEQ6ZT21 453 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 SPATA12Q7Z6I5 190 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 PACRGLQ8N7B6 248 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 CNEP1R1Q8N9A8 125 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 OR13C8Q8NGS7 320 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 NMNAT3Q96T66 252 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 TRIM4Q9C037 500 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 AICDAQ9GZX7 198 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 PRELID1Q9Y255 219 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 HSPE1-MOB4S4R3N1 261 aa2.02□□□□□ -2.09
SNRPF-202ENST00000549580 GRIN2BQ13224 1484 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 LCTP09848 1927 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 ADGRL3Q9HAR2 1447 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 A0A087WUJ7 227 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 IGKV3D-11A0A0A0MRZ8 115 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 G3V3Q6 166 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 CNIH1O95406 144 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 HAND1O96004 215 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 SERPINA1P01009 418 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 TTRP02766 147 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 CTSGP08311 255 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 GZMBP10144 247 aa2.01□□□□□ -2.09
SNRPF-202ENST00000549580 HIST1H1TP22492 207 aaPredicted RBP2.01□□□□□ -2.09
SNRPF-202ENST00000549580 RBM11P57052 281 aaKnown RBP2.01□□□□□ -2.09
SNRPF-202ENST00000549580 TAS2R20P59543 309 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms