RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SMDT1Q9H4I9 107 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 ZNRD1Q9P1U0 126 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 GNG12Q9UBI6 72 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 VAX2Q9UIW0 290 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 K7EM74 188 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 MAS1LP35410 378 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 NHLH1Q02575 133 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 SSX2Q16385 188 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 TBC1D28Q2M2D7 210 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 GTF3AQ92664 365 aaKnown RBP9.28□□□□□ -0.92
LINC00661-204ENST00000549354 RAB40CQ96S21 281 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 PARLQ9H300 379 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 CISD1Q9NZ45 108 aaKnown RBP9.28□□□□□ -0.92
LINC00661-204ENST00000549354 MPC1Q9Y5U8 109 aa9.28□□□□□ -0.92
LINC00661-204ENST00000549354 C17orf98A8MV24 154 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 FGF7P21781 194 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 MPV17P39210 176 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 PKIAP61925 76 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 GNG3P63215 75 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 HBG1P69891 147 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 HBG2P69892 147 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 MEF2BQ02080 365 aaPredicted RBP9.27□□□□□ -0.93
LINC00661-204ENST00000549354 OR8G1Q15617 311 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 KRTCAP3Q53RY4 240 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 UTF1Q5T230 341 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 VWA1Q6PCB0 445 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 DRAM1Q8N682 238 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 FAM169BQ8N8A8 192 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 STARD4Q96DR4 205 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 TIMM8BQ9Y5J9 83 aaPredicted RBP9.27□□□□□ -0.93
LINC00661-204ENST00000549354 FCGR3BO75015 233 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 IGKV3-15P01624 115 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 CASP6P55212 293 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 FOXF2Q12947 444 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF585BQ52M93 769 aa9.27□□□□□ -0.93
LINC00661-204ENST00000549354 TAF15Q92804 592 aaKnown RBP eCLIP9.27□□□□□ -0.93
LINC00661-204ENST00000549354 TIMM8AO60220 97 aaPredicted RBP9.26□□□□□ -0.93
LINC00661-204ENST00000549354 OR4A8P0C604 315 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
LINC00661-204ENST00000549354 FFAR4Q5NUL3 377 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 FAM78BQ5VT40 261 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 OR10G4Q8NGN3 311 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 OR10G9Q8NGN4 311 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 OR10G7Q8NGN6 311 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 WDR61Q9GZS3 305 aaKnown RBP9.26□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF71Q9NQZ8 489 aaPredicted RBP9.26□□□□□ -0.93
LINC00661-204ENST00000549354 CBLN4Q9NTU7 201 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 PITPNC1Q9UKF7 332 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 GRIFINA4D1Z8 144 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 SMPD2O60906 423 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 TCF23Q7RTU1 214 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 REC114Q7Z4M0 266 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 OR1P1Q8NH06 330 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 LURAP1Q96LR2 239 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 TUBG2Q9NRH3 451 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 MKRN2OSH3BPM6 223 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 IGLV1-44P01699 117 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 PSMB3P49720 205 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 MRPL49Q13405 166 aaKnown RBP9.26□□□□□ -0.93
LINC00661-204ENST00000549354 MALRD1Q5VYJ5 2156 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 MRGPRGQ86SM5 289 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 WDR86Q86TI4 376 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 SPACA3Q8IXA5 215 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 ABHD12Q8N2K0 398 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF709Q8N972 641 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 ZNRF1Q8ND25 227 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 SGK494Q96LW2 274 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 SCNM1Q9BWG6 230 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 MSRB2Q9Y3D2 182 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 FAM215AQ9Y5M1 114 aa9.26□□□□□ -0.93
LINC00661-204ENST00000549354 ELOA3CA0A087WX78 387 aaPredicted RBP9.25□□□□□ -0.93
LINC00661-204ENST00000549354 OR5B21A6NL26 309 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 IGLV2-14P01704 120 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 RAC2P15153 192 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 TIMP3P35625 211 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 FOXC1Q12948 553 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 TMEM41BQ5BJD5 291 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 EREGO14944 169 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 GATA2P23769 480 aaPredicted RBP9.25□□□□□ -0.93
LINC00661-204ENST00000549354 GNG10P50151 68 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 LRRC75BQ2VPJ9 315 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF573Q86YE8 665 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 RAB24Q969Q5 203 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 GCM1Q9NP62 436 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 NAT8Q9UHE5 227 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 ARHGAP32A7KAX9 2087 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 ZNF320A2RRD8 509 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 K7ENP7 123 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 IFNA1P01562 189 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 PPP1CBP62140 327 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 TMEM183AQ8IXX5 376 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 TMEM256Q8N2U0 113 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 OR2Z1Q8NG97 314 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 PINX1Q96BK5 328 aaKnown RBP9.25□□□□□ -0.93
LINC00661-204ENST00000549354 IMMP2LQ96T52 175 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 PKIBQ9C010 78 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 OR51I2Q9H344 312 aa9.25□□□□□ -0.93
LINC00661-204ENST00000549354 HEYLQ9NQ87 328 aaPredicted RBP9.25□□□□□ -0.93
LINC00661-204ENST00000549354 KCNIP1Q9NZI2 227 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 164 ms