RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 AKR1C2P52895 323 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 S100A10P60903 97 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 ERVK-16P61578 105 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 GNB2P62879 340 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 EIF5AP63241 154 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 TAGLNQ01995 201 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 C2orf68Q2NKX9 166 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 LRRC37A5PQ49AS3 106 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 HEPN1Q6WQI6 88 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 ACOT7LQ6ZUV0 252 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 FAM219AQ8IW50 185 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 SELENOHQ8IZQ5 122 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 DRAM1Q8N682 238 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 TCTEX1D2Q8WW35 142 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 DCUN1D4Q92564 292 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 LSM10Q969L4 123 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 TP53RKQ96S44 253 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 MFFQ9GZY8 342 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 DCAF16Q9NXF7 216 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 RPUSD1Q9UJJ7 312 aaKnown RBP5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 SOX21Q9Y651 276 aaPredicted RBP5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 AUP1Q9Y679 476 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 TANC2Q9HCD6 1990 aa5.78□□□□□ -1.48
DEPDC4-208ENST00000549341 A0A1B0GU03 582 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 A0A1B0GUS0 222 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 A0A1B0GW55 424 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 E5RGE8 158 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 CLDN34H7C241 214 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 TOR1AO14656 332 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 TNFRSF13BO14836 293 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 ARPC5O15511 151 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 ST8SIA3O43173 380 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 TSC22D2O75157 780 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 MED6O75586 246 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 LY86O95711 162 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 SCGB1D2O95969 90 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 IFNA7P01567 189 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 RBP4P02753 201 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 DUX4L2P0CJ85 424 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 DUX4L3P0CJ86 424 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 DUX4L4P0CJ87 422 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 DUX4L5P0CJ88 424 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 DUX4L6P0CJ89 424 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 DUX4L7P0CJ90 424 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 CGB3P0DN86 165 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 CGB7P0DN87 165 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 IGHV4-38-2P0DP08 117 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 RRASP10301 218 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 SELLP14151 372 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 MMP9P14780 707 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 S100A11P31949 105 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 NKX2-1P43699 371 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 ARHGDIBP52566 201 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 PRRX1P54821 245 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 KRTAP10-3P60369 221 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 VAMP2P63027 116 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 HOXA4Q00056 320 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF345Q14585 488 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 NDUFA5Q16718 116 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 C17orf58Q2M2W7 97 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 BEAN1Q3B7T3 259 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 KLF17Q5JT82 389 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 FAM71F2Q6NXP2 309 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 PRSS54Q6PEW0 395 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 ZNF767PQ75MW2 155 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 LYZL2Q7Z4W2 148 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 C9orf62Q8N4C0 152 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 SLC35G3Q8N808 338 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 C8orf31Q8N9H6 132 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 OR1S1Q8NH92 325 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 TNFRSF14Q92956 283 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 WDR89Q96FK6 387 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 DCTN5Q9BTE1 182 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 ARL6Q9H0F7 186 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 PLEKHA2Q9HB19 425 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 PATZ1Q9HBE1 687 aaKnown RBP5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 SDHAF2Q9NX18 166 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 DUX4Q9UBX2 424 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 RNF150Q9ULK6 438 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 NSG2Q9Y328 171 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 AMMECR1Q9Y4X0 333 aaPredicted RBP5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 MMP24Q9Y5R2 645 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 KIAA2026Q5HYC2 2103 aa5.77□□□□□ -1.49
DEPDC4-208ENST00000549341 TRAV40A0A0B4J280 105 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 PPIAL4CA0A0B4J2A2 164 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 M0R1X1 148 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 TAAR5O14804 337 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 RBFOX2O43251 390 aaKnown RBP eCLIP5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 GPR137BO60478 399 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 SCAF4O95104 1147 aaKnown RBP5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 HPRT1P00492 218 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 APOA2P02652 100 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 LIPFP07098 398 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 PPIAL4GP0DN37 164 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 LPAR6P43657 344 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 AP2S1P53680 142 aaPredicted RBP5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 LOXL3P58215 753 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 ERVFRD-1P60508 538 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 RAB14P61106 215 aa5.76□□□□□ -1.49
DEPDC4-208ENST00000549341 OPCMLQ14982 345 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms