RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 MMD2Q8IY49 270 aa8.79□□□□□ -1
BEST3-209ENST00000548658 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
BEST3-209ENST00000548658 BEST4Q8NFU0 473 aa8.79□□□□□ -1
BEST3-209ENST00000548658 OR6Q1Q8NGQ2 317 aa8.79□□□□□ -1
BEST3-209ENST00000548658 S100A16Q96FQ6 103 aaKnown RBP8.79□□□□□ -1
BEST3-209ENST00000548658 C5orf30Q96GV9 206 aa8.79□□□□□ -1
BEST3-209ENST00000548658 SPIN2AQ99865 258 aa8.79□□□□□ -1
BEST3-209ENST00000548658 SPIN2BQ9BPZ2 258 aa8.79□□□□□ -1
BEST3-209ENST00000548658 AIFM2Q9BRQ8 373 aa8.79□□□□□ -1
BEST3-209ENST00000548658 J3QRK9 145 aa8.78□□□□□ -1
BEST3-209ENST00000548658 MPPED1O15442 326 aa8.78□□□□□ -1
BEST3-209ENST00000548658 SSX5O60225 188 aa8.78□□□□□ -1
BEST3-209ENST00000548658 TNFAIP8O95379 198 aa8.78□□□□□ -1
BEST3-209ENST00000548658 LY86O95711 162 aa8.78□□□□□ -1
BEST3-209ENST00000548658 CLEC2LP0C7M8 214 aa8.78□□□□□ -1
BEST3-209ENST00000548658 SLURP1P55000 103 aa8.78□□□□□ -1
BEST3-209ENST00000548658 SSBP2P81877 361 aaPredicted RBP8.78□□□□□ -1
BEST3-209ENST00000548658 CDK10Q15131 360 aa8.78□□□□□ -1
BEST3-209ENST00000548658 TNXAQ16473 311 aa8.78□□□□□ -1
BEST3-209ENST00000548658 TATDN3Q17R31 274 aa8.78□□□□□ -1
BEST3-209ENST00000548658 ZNF66Q6ZN08 573 aa8.78□□□□□ -1
BEST3-209ENST00000548658 HOGA1Q86XE5 327 aa8.78□□□□□ -1
BEST3-209ENST00000548658 ZBTB34Q8NCN2 500 aa8.78□□□□□ -1
BEST3-209ENST00000548658 TSPAN14Q8NG11 270 aa8.78□□□□□ -1
BEST3-209ENST00000548658 OR5H6Q8NGV6 325 aa8.78□□□□□ -1
BEST3-209ENST00000548658 OR4S2Q8NH73 311 aa8.78□□□□□ -1
BEST3-209ENST00000548658 SRSF12Q8WXF0 261 aaKnown RBP8.78□□□□□ -1
BEST3-209ENST00000548658 ACOT12Q8WYK0 555 aa8.78□□□□□ -1
BEST3-209ENST00000548658 PRR25Q96S07 402 aa8.78□□□□□ -1
BEST3-209ENST00000548658 TINAGL1Q9GZM7 467 aaPredicted RBP8.78□□□□□ -1
BEST3-209ENST00000548658 COA4Q9NYJ1 87 aa8.78□□□□□ -1
BEST3-209ENST00000548658 SMAD5-AS1Q9Y6J3 95 aa8.78□□□□□ -1
BEST3-209ENST00000548658 SORL1Q92673 2214 aa8.78□□□□□ -1
BEST3-209ENST00000548658 AIREO43918 545 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 HRASP01112 189 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 OR9G9P0C7N8 305 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 KIR2DS2P43631 304 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 FAM209BQ5JX69 171 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 SLC25A42Q86VD7 318 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 BORCS5Q969J3 196 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 SLC25A38Q96DW6 304 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 RNF167Q9H6Y7 350 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 AUNIPQ9H7T9 357 aa8.77□□□□□ -1.01
BEST3-209ENST00000548658 IGKV1D-13A0A0B4J2D9 117 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 FAM223BA6NKX1 122 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 XRCC3O43542 346 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 OR2A4O95047 310 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 IGLV2-14P01704 120 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 SAA1P0DJI8 122 aaPredicted RBP8.76□□□□□ -1.01
BEST3-209ENST00000548658 IGKV1-13P0DP09 117 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 FCGR2CP31995 323 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 MAS1LP35410 378 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 MRGPRG-AS1Q2M3A8 158 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 ZNF343Q6P1L6 599 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 IDO2Q6ZQW0 420 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 FAM223AQ8IWN6 122 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 MFSD4AQ8N468 514 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 ADAD2Q8NCV1 583 aaKnown RBP8.76□□□□□ -1.01
BEST3-209ENST00000548658 OR13F1Q8NGS4 319 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 TCTEX1D2Q8WW35 142 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 SNAPC3Q92966 411 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 OR2A7Q96R45 310 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 ZNF430Q9H8G1 570 aaPredicted RBP8.76□□□□□ -1.01
BEST3-209ENST00000548658 TAS2R8Q9NYW2 309 aa8.76□□□□□ -1.01
BEST3-209ENST00000548658 PEF1Q9UBV8 284 aaKnown RBP8.76□□□□□ -1.01
BEST3-209ENST00000548658 PPYP01298 95 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 RPL30P62888 115 aaKnown RBP8.75□□□□□ -1.01
BEST3-209ENST00000548658 CATR1Q13166 79 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 KLF5Q13887 457 aaPredicted RBP8.75□□□□□ -1.01
BEST3-209ENST00000548658 UBE2NLQ5JXB2 153 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 ANKRD13BQ86YJ7 626 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 TTC9CQ8N5M4 171 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 GVQW1Q8N7I0 195 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 OR5AP2Q8NGF4 316 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 CD300LFQ8TDQ1 290 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 SECTM1Q8WVN6 248 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 GIMAP1Q8WWP7 306 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 WWC2-AS2Q96NR7 200 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 IFT46Q9NQC8 304 aa8.75□□□□□ -1.01
BEST3-209ENST00000548658 TNCP24821 2201 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 SMIM31A0A1B0GVY4 71 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 ANKRD34BA5PLL1 514 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 DPPA5A6NC42 116 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 RBFOX2O43251 390 aaKnown RBP eCLIP8.74□□□□□ -1.01
BEST3-209ENST00000548658 KBTBD11O94819 623 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 DHFRP00374 187 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 APELAP0DMC3 54 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 GP9P14770 177 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 SPNP16150 400 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 RPS19P39019 145 aaKnown RBP8.74□□□□□ -1.01
BEST3-209ENST00000548658 ATP5G2Q06055 141 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 EIF4EBP1Q13541 118 aaPredicted RBP8.74□□□□□ -1.01
BEST3-209ENST00000548658 RPEL1Q2QD12 228 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 OR2B11Q5JQS5 317 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 TMEM69Q5SWH9 247 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 C11orf87Q6NUJ2 197 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 NECAP1Q8NC96 275 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 OR9G4Q8NGQ1 327 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 OR4A5Q8NH83 315 aa8.74□□□□□ -1.01
BEST3-209ENST00000548658 TMEM167AQ8TBQ9 72 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms