RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 ADAD2Q8NCV1 583 aaKnown RBP6.9□□□□□ -1.3
VPS29-203ENST00000546588 OR10V1Q8NGI7 309 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 OR5M8Q8NGP6 311 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 OR1L1Q8NH94 360 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 IL22RA2Q969J5 263 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 MSI2Q96DH6 328 aaKnown RBP6.9□□□□□ -1.3
VPS29-203ENST00000546588 C5orf30Q96GV9 206 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 TIMD4Q96H15 378 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 CCL13Q99616 98 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 NAA60Q9H7X0 242 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 UBTD1Q9HAC8 227 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 PATZ1Q9HBE1 687 aaKnown RBP6.9□□□□□ -1.3
VPS29-203ENST00000546588 LIN7CQ9NUP9 197 aaKnown RBP6.9□□□□□ -1.3
VPS29-203ENST00000546588 RDH8Q9NYR8 311 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 CALYQ9NYX4 217 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 OR1A1Q9P1Q5 309 aa6.9□□□□□ -1.3
VPS29-203ENST00000546588 C14orf166Q9Y224 244 aaKnown RBP6.9□□□□□ -1.3
VPS29-203ENST00000546588 TRGV10A0A0A0MS01 117 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 H0Y980 276 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 DVL1O14640 695 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 NDUFB3O43676 98 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 DFFBO76075 338 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 RGS11O94810 467 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 IGHV4-39P01824 125 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 RLN1P04808 185 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 GIPP09681 153 aaPredicted RBP6.89□□□□□ -1.31
VPS29-203ENST00000546588 COX6B1P14854 86 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 RPA2P15927 270 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 IL2RGP31785 369 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 ZNF137PP52743 207 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 PIGPP57054 158 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 RPL31P62899 125 aaKnown RBP6.89□□□□□ -1.31
VPS29-203ENST00000546588 BLOC1S1P78537 153 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 PAX2Q02962 417 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 FHL3Q13643 280 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 TMEM187Q14656 261 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 FCN2Q15485 313 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 MORN2Q502X0 79 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 CYB5R2Q6BCY4 276 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 SP5Q6BEB4 398 aaPredicted RBP6.89□□□□□ -1.31
VPS29-203ENST00000546588 LYPD2Q6UXB3 125 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 ZNF818PQ6ZRF7 136 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 C12orf45Q8N5I9 185 aaPredicted RBP6.89□□□□□ -1.31
VPS29-203ENST00000546588 LINC00311Q8N616 119 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 ZNF645Q8N7E2 425 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 TPRX1Q8N7U7 411 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 OR52B4Q8NGK2 314 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 GLYATL2Q8WU03 294 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 RTN4IP1Q8WWV3 396 aaPredicted RBP6.89□□□□□ -1.31
VPS29-203ENST00000546588 TMEM56Q96MV1 263 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 ZNF714Q96N38 554 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 PHB2Q99623 299 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 MED28Q9H204 178 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 RAB18Q9NP72 206 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 RPUSD1Q9UJJ7 312 aaKnown RBP6.89□□□□□ -1.31
VPS29-203ENST00000546588 GOLT1BQ9Y3E0 138 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 TMEM56-RWDD3S4R434 201 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 FBN2P35556 2912 aa6.89□□□□□ -1.31
VPS29-203ENST00000546588 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 MPPED1O15442 326 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 CDS2O95674 445 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 C1QBP02746 253 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 ELANEP08246 267 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 ANXA3P12429 323 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 NDUFB7P17568 137 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 CXCL3P19876 107 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 F2RP25116 425 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 PAX6P26367 422 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 SSTR2P30874 369 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 CDKN1AP38936 164 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 RAB7AP51149 207 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 H2BFSP57053 126 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 SRPXP78539 464 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 TNFRSF9Q07011 255 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 IL15RAQ13261 267 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 EDDM3AQ14507 147 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 ZNF273Q14593 569 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 RNF212Q495C1 297 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 GPR157Q5UAW9 335 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 CST9LP1Q5W188 147 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 WDR25Q64LD2 544 aaPredicted RBP6.88□□□□□ -1.31
VPS29-203ENST00000546588 DGAT2L7PQ6IED9 249 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 SLC25A48Q6ZT89 311 aaKnown RBP6.88□□□□□ -1.31
VPS29-203ENST00000546588 C5orf24Q7Z6I8 188 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 TMED4Q7Z7H5 227 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 SGPP2Q8IWX5 399 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 LRRC75A-AS1Q8N1F1 130 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 KIR3DL3Q8N743 410 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 BOLLQ8N9W6 283 aaKnown RBP6.88□□□□□ -1.31
VPS29-203ENST00000546588 ARL11Q969Q4 196 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 PDCD10Q9BUL8 212 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 HINT2Q9BX68 163 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 TMEM222Q9H0R3 208 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 IFI27L2Q9H2X8 130 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 IDI2-AS1Q9NZ38 188 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 PIPOXQ9P0Z9 390 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 RALYQ9UKM9 306 aaKnown RBP6.88□□□□□ -1.31
VPS29-203ENST00000546588 CHD6Q8TD26 2715 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 USF3Q68DE3 2245 aa6.88□□□□□ -1.31
VPS29-203ENST00000546588 TRAV39A0A0B4J263 110 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms