RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 IL36RNQ9UBH0 155 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 SLC25A10Q9UBX3 287 aaPredicted RBP5.4□□□□□ -1.54
SNHG1-225ENST00000545920 JPT1Q9UK76 154 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 LOXL2Q9Y4K0 774 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 RFNGQ9Y644 331 aa5.4□□□□□ -1.54
SNHG1-225ENST00000545920 UNC79Q9P2D8 2635 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 KIAA1549Q9HCM3 1950 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 A0A1W2PPQ1 181 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 A0A1W2PR80 420 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 C12orf77C9JDV5 145 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 SIRPB1O00241 398 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 HSPB6O14558 160 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 YPEL1O60688 119 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 PAGE4O60829 102 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 SMPD2O60906 423 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 IL18BPO95998 194 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 IGKV1D-33P01593 117 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 IGKV1-33P01594 117 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 HBZP02008 142 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 CFIP05156 583 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 REG1AP05451 166 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 OR10J4P0C629 311 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 STAG3L2P0CL84 134 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 STAG3L3P0CL85 134 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 TDGF1P13385 188 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 IL3RAP26951 378 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 RAB7AP51149 207 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 NUTF2P61970 127 aaKnown RBP5.39□□□□□ -1.55
SNHG1-225ENST00000545920 RHOBP62745 196 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 Q0VG73 95 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 WDR73Q6P4I2 378 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 TOMM20LQ6UXN7 152 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 MDP1Q86V88 176 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 ZNF664Q8N3J9 261 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 C17orf78Q8N4C9 275 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 TMEM251Q8N6I4 163 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 SDSLQ96GA7 329 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 SFRP2Q96HF1 295 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 YPEL2Q96QA6 119 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 RNF2Q99496 336 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 OR2D2Q9H210 308 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 SLC25A22Q9H936 323 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 TMEM167BQ9NRX6 74 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 FKBP11Q9NYL4 201 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 FUT9Q9Y231 359 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 TRAPPC1Q9Y5R8 145 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 ASXL3Q9C0F0 2248 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 CACNA1EQ15878 2313 aa5.39□□□□□ -1.55
SNHG1-225ENST00000545920 BRCA2P51587 3418 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 TRGV10A0A0A0MS01 117 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 PINLYPA6NC86 204 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 MARCH11A6NNE9 402 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 C15orf62A8K5M9 175 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 RHBDL1O75783 438 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 S1PR2O95136 353 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 MT-CO3P00414 261 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 SP1P08047 785 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 OR3A1P47881 315 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 RPL29P47914 159 aaKnown RBP5.38□□□□□ -1.55
SNHG1-225ENST00000545920 ERVS71-1P61550 626 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 GAGE1Q13065 139 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 POU2AF1Q16633 256 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 PDZD11Q5EBL8 140 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 RASL11AQ6T310 242 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 ACP7Q6ZNF0 438 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 MDS2Q8NDY4 140 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 OR10G8Q8NGN5 311 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 OR4A16Q8NH70 328 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 SLC35E1Q96K37 410 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 NEU1Q99519 415 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 GNB1LQ9BYB4 327 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 NPVFQ9HCQ7 196 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 ELOVL5Q9NYP7 299 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 IL36BQ9NZH7 164 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 NAGKQ9UJ70 344 aa5.38□□□□□ -1.55
SNHG1-225ENST00000545920 CEP192Q8TEP8 1941 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 SAA2-SAA4A0A096LPE2 208 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 A0A0U1RQK1 487 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 ZNF320A2RRD8 509 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 ZNF503-AS2A6NEH8 195 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 ZNF705GA8MUZ8 300 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-225ENST00000545920 F2RL2O00254 374 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 TCAPO15273 167 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 LAMTOR5O43504 91 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 ZG16O60844 167 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 RBMXL2O75526 392 aaKnown RBP5.37□□□□□ -1.55
SNHG1-225ENST00000545920 TNFSF13O75888 250 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 NXPH3O95157 252 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 IGHV3-9P01782 118 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 DUTP33316 252 aaKnown RBP5.37□□□□□ -1.55
SNHG1-225ENST00000545920 G6PCP35575 357 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 TIMP3P35625 211 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 MAGEA5P43359 124 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 VDAC2P45880 294 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-225ENST00000545920 GPR12P47775 334 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 MEOX1P50221 254 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 GNB1P62873 340 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 RPL30P62888 115 aaKnown RBP5.37□□□□□ -1.55
SNHG1-225ENST00000545920 SRYQ05066 204 aa5.37□□□□□ -1.55
SNHG1-225ENST00000545920 TRIP6Q15654 476 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms