RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 LINC00614P0C842 121 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 ERVFC1-1P60608 527 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 CEACAM21Q3KPI0 293 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 C16orf92Q96LL3 132 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 DUX5Q96PT3 197 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 SLC35B3Q9H1N7 401 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 WASHC3Q9Y3C0 194 aa7.36□□□□□ -1.23
CLIP1-218ENST00000545889 ABCA2Q9BZC7 2435 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 ODAMA1E959 279 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 DHRS7CA6NNS2 312 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 CDRT15L2A8MXV6 281 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 RAMP1O60894 148 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 ADAP1O75689 374 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 TMEM33P57088 247 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 ANKRD55Q3KP44 614 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 PIGYQ3MUY2 71 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 PIP4P1Q86T03 277 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 C11orf44Q8N8P7 122 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 ZBTB34Q8NCN2 500 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 OR4X1Q8NH49 305 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 NUDT11Q96G61 164 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 RNF2Q99496 336 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 XIRP2A4UGR9 3374 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 DXOO77932 396 aaKnown RBP7.35□□□□□ -1.23
CLIP1-218ENST00000545889 ISG15P05161 165 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 NPY1RP25929 384 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 ZP4Q12836 540 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 DEPPQ9NTK1 212 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 DLL3Q9NYJ7 618 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 VCANP13611 3396 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 TLN1Q9Y490 2541 aaKnown RBP7.35□□□□□ -1.23
CLIP1-218ENST00000545889 TMEM272A0A1B0GTI8 110 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 LOC102723971A0A1B0GUV8 181 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 A8MWP6 167 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 PLPP2O43688 288 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 ATP6V1FQ16864 119 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 C12orf54Q6X4T0 127 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 FA2HQ7L5A8 372 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 SLC35E3Q7Z769 313 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 C5orf17Q8NAS9 161 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 CCL28Q9NRJ3 127 aa7.35□□□□□ -1.23
CLIP1-218ENST00000545889 SLC25A17O43808 307 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 IGHV2-5P01817 119 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 ASAH2BP0C7U1 165 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HTN3P15516 51 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF137PP52743 207 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 LRRC75BQ2VPJ9 315 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 NAA60Q9H7X0 242 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 ANKRD11Q6UB99 2663 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-218ENST00000545889 FREM3P0C091 2139 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 IGKV3D-15A0A087WSY6 115 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 NDUFS8O00217 210 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 IGKV3-15P01624 115 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 PPOXP50336 477 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 DSCR9P59020 149 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 ATP5G2Q06055 141 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 FAM162BQ5T6X4 162 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HCP5Q6MZN7 132 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 CD200R1LQ6Q8B3 271 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 NHLRC2Q8NBF2 726 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 OR2T10Q8NGZ9 312 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 RSPO3Q9BXY4 272 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-218ENST00000545889 OR2W1Q9Y3N9 320 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 ZNF462Q96JM2 2506 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H2BKO60814 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 PPYP01298 95 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H2BJP06899 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 CECR9P0C854 216 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H2BOP23527 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H2BBP33778 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H2BDP58876 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H2BCP62807 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 IL13RA2Q14627 380 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST2H2BEQ16778 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.34□□□□□ -1.23
CLIP1-218ENST00000545889 FAM78BQ5VT40 261 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 C16orf54Q6UWD8 224 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 LINC00596Q86U02 117 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 WDFY1Q8IWB7 410 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 OR10J6PQ8NGY7 276 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H2BHQ93079 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H2BNQ99877 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 HIST1H2BMQ99879 126 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 VAMP8Q9BV40 100 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 DPM3Q9P2X0 92 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 COL6A3P12111 3177 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 EYSQ5T1H1 3165 aa7.34□□□□□ -1.23
CLIP1-218ENST00000545889 PINLYPA6NC86 204 aa7.34□□□□□ -1.24
CLIP1-218ENST00000545889 CRXO43186 299 aaPredicted RBP7.34□□□□□ -1.24
CLIP1-218ENST00000545889 SYNGR2O43760 224 aa7.34□□□□□ -1.24
CLIP1-218ENST00000545889 OR5AC1P0C628 307 aa7.34□□□□□ -1.24
CLIP1-218ENST00000545889 KLK2P20151 261 aa7.34□□□□□ -1.24
CLIP1-218ENST00000545889 ZNF429Q86V71 674 aa7.34□□□□□ -1.24
CLIP1-218ENST00000545889 NUDT10Q8NFP7 164 aa7.34□□□□□ -1.24
CLIP1-218ENST00000545889 PGLYRP3Q96LB9 341 aa7.34□□□□□ -1.24
CLIP1-218ENST00000545889 TBX15Q96SF7 602 aa7.34□□□□□ -1.24
CLIP1-218ENST00000545889 ALKBH7Q9BT30 221 aaPredicted RBP7.34□□□□□ -1.24
CLIP1-218ENST00000545889 CALYQ9NYX4 217 aa7.34□□□□□ -1.24
CLIP1-218ENST00000545889 PHF3Q92576 2039 aaKnown RBP7.34□□□□□ -1.24
CLIP1-218ENST00000545889 A0A1W2PNU3 283 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms