RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 DEFA4P12838 97 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 GABRA2P47869 451 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 EDDM3BP56851 147 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 RANP62826 216 aaKnown RBP7.28□□□□□ -1.24
TDP1-204ENST00000545686 ZXDAP98168 799 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 AESQ08117 197 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 ZNF718Q3SXZ3 478 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 TREML4Q6UXN2 200 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 TEX43Q6ZNM6 134 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 ZNF114Q8NC26 417 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 GGTLC1Q9BX51 225 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 ZDHHC11Q9H8X9 412 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 IL36BQ9NZH7 164 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 PATE3B3GLJ2 98 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 SPINT2O43291 252 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 YPEL1O60688 119 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 MT-CO2P00403 227 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 OR9G9P0C7N8 305 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 MEOX1P50221 254 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 RPS16P62249 146 aaKnown RBP7.28□□□□□ -1.24
TDP1-204ENST00000545686 TGFBR3Q03167 851 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 PSG7Q13046 419 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 C3AR1Q16581 482 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 SMIM21Q3B7S5 101 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 GCSAMLQ5JQS6 135 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 DCAF10Q5QP82 559 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 MRGPRDQ8TDS7 321 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 YPEL2Q96QA6 119 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 MGST2Q99735 147 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 CXXC4Q9H2H0 198 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 PLA2G3Q9NZ20 509 aa7.28□□□□□ -1.24
TDP1-204ENST00000545686 MED13Q9UHV7 2174 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 TMEM265A0A087WTH1 108 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 TRGV8A0A0C4DH27 118 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 C21orf140B9A014 251 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 TNFSF13O75888 250 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 CELA3BP08861 270 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 EGR1P18146 543 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 DUTP33316 252 aaKnown RBP7.27□□□□□ -1.24
TDP1-204ENST00000545686 VDAC2P45880 294 aaPredicted RBP7.27□□□□□ -1.24
TDP1-204ENST00000545686 SPINK9Q5DT21 86 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 PRAMEF5Q5TYX0 476 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 PRAMEF6Q5VXH4 476 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 INO80CQ6PI98 192 aaPredicted RBP7.27□□□□□ -1.24
TDP1-204ENST00000545686 C11orf53Q8IXP5 236 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 UBALD2Q8IYN6 164 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 OR4A16Q8NH70 328 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 MAFAQ8NHW3 353 aaPredicted RBP7.27□□□□□ -1.24
TDP1-204ENST00000545686 HLA-CQ95604 372 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 TMEM68Q96MH6 324 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 TBX15Q96SF7 602 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 TUBG2Q9NRH3 451 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 PSG11Q9UQ72 335 aa7.27□□□□□ -1.24
TDP1-204ENST00000545686 TANC2Q9HCD6 1990 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 DSCAML1Q8TD84 2053 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 SCO2A0A1W2PP80 73 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 A8MXE2 369 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 KLRC4-KLRK1H3BQV0 150 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 C15orf65H3BRN8 121 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 SP1P08047 785 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 AREGP15514 252 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 SSTR5P35346 364 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 KIR2DS2P43631 304 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 GPR12P47775 334 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 ERVK-16P61578 105 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 RPL19P84098 196 aaKnown RBP7.27□□□□□ -1.25
TDP1-204ENST00000545686 Q0VG73 95 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 FOXF2Q12947 444 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 TMEM183BQ1AE95 376 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 ALKBH6Q3KRA9 238 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 MDS2Q8NDY4 140 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 WFIKKN1Q96NZ8 548 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 PATZ1Q9HBE1 687 aaKnown RBP7.27□□□□□ -1.25
TDP1-204ENST00000545686 OBP2BQ9NPH6 170 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 AURKAIP1Q9NWT8 199 aaPredicted RBP7.27□□□□□ -1.25
TDP1-204ENST00000545686 PPP1R14DQ9NXH3 145 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 JPT1Q9UK76 154 aa7.27□□□□□ -1.25
TDP1-204ENST00000545686 LSM4Q9Y4Z0 139 aaKnown RBP7.27□□□□□ -1.25
TDP1-204ENST00000545686 TRGV10A0A0A0MS01 117 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 A0A1B0GWJ7 208 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 PGPEP1LA6NFU8 196 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 ZNF705FA8MVS1 300 aaPredicted RBP7.26□□□□□ -1.25
TDP1-204ENST00000545686 WNT9BO14905 357 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 NUPR1O60356 82 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 GFRA3O60609 400 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 CRYABP02511 175 aaKnown RBP7.26□□□□□ -1.25
TDP1-204ENST00000545686 ZNF705DP0CH99 300 aaPredicted RBP7.26□□□□□ -1.25
TDP1-204ENST00000545686 ZNF705BP0CI00 300 aaPredicted RBP7.26□□□□□ -1.25
TDP1-204ENST00000545686 CRISP2P16562 243 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 GCHFRP30047 84 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 RHOBP62745 196 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 ZNF90Q03938 601 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 TPTE2P1Q5T6R2 138 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 FAM53AQ6NSI3 398 aaPredicted RBP7.26□□□□□ -1.25
TDP1-204ENST00000545686 Q6ZR03 302 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 TCF23Q7RTU1 214 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 OR13A1Q8NGR1 328 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 OCC1Q8TAD7 63 aa7.26□□□□□ -1.25
TDP1-204ENST00000545686 KLF14Q8TD94 323 aaPredicted RBP7.26□□□□□ -1.25
TDP1-204ENST00000545686 UHRF2Q96PU4 802 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms