RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 ZFC3H1O60293 1989 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CHD3Q12873 2000 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 NSG1A0A0A6YYJ2 146 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 LOC102725191A0A1B0GVB3 256 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 FAM90A10PA6NDY2 464 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 TMEM233B4DJY2 109 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 FAM90A26D6RGX4 464 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 H3BTX0 84 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 H3BUT2 72 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 ZIC3O60481 467 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 MT-ATP8P03928 68 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 LGALS1P09382 135 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 AMY2BP19961 511 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CD38P28907 300 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 VDAC2P45880 294 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CSRP3P50461 194 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF157P51786 506 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 DLX1P56177 255 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CAV3P56539 151 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 TMEM258P61165 79 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 RPS4XP62701 263 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 ATXN7L3Q14CW9 347 aaPredicted RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CRB2Q5IJ48 1285 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 ENTPD8Q5MY95 495 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 BPIFA4PQ86YQ2 179 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 C10orf126Q8N4M7 172 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 APCDD1LQ8NCL9 501 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CISD1Q9NZ45 108 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 RARRES3Q9UL19 164 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 RCL1Q9Y2P8 373 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 OR1A2Q9Y585 309 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 LTBP1Q14766 1721 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 EVPLQ92817 2033 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 TSPAN11A1L157 253 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 LRRC30A6NM36 301 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 ADARB2-AS1A8MUL3 147 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 K7ENP7 123 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 SH2D1BO14796 132 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 MRPL3P09001 348 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 SMIM13P0DJ93 91 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 KLK2P20151 261 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 OPRK1P41145 380 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 RND3P61587 244 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 POLR2LP62875 67 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 SPEM2Q0P670 501 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CEACAM16Q2WEN9 425 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 LRRC37A5PQ49AS3 106 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 GAGE13Q4V321 117 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 ASPHD1Q5U4P2 390 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 LYRM7Q5U5X0 104 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 C12orf73Q69YU5 71 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 SLC35E4Q6ICL7 350 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CYP2G1PQ6ZSU1 146 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 SLC22A18ASQ8N1D0 253 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 C1orf158Q8N1D5 194 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CYB561D1Q8N8Q1 229 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 SGMS2Q8NHU3 365 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 PPDPFLQ8WWR9 84 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 COPS9Q8WXC6 57 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 CRYGNQ8WXF5 182 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF670Q9BS34 389 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF442Q9H7R0 627 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 GP6Q9HCN6 339 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 RETNQ9HD89 108 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 NRN1Q9NPD7 142 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 DNAJB12Q9NXW2 375 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 FTSJ1Q9UET6 329 aa4.31□□□□□ -1.72
UBE4A-203ENST00000545354 RANBP2P49792 3224 aaKnown RBP4.31□□□□□ -1.72
UBE4A-203ENST00000545354 BRCA2P51587 3418 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 THSD7BQ9C0I4 1608 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 A0A087WWL8 130 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 PRSS29PA6NIE9 313 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 FAM90A27PA6NNH2 459 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 DEDDO75618 318 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 DUSP14O95147 198 aaKnown RBP4.3□□□□□ -1.72
UBE4A-203ENST00000545354 SLC25A5P05141 298 aaKnown RBP4.3□□□□□ -1.72
UBE4A-203ENST00000545354 GATA1P15976 413 aaPredicted RBP4.3□□□□□ -1.72
UBE4A-203ENST00000545354 NTF4P34130 210 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 SSR4P51571 173 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 RPL15P61313 204 aaKnown RBP4.3□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF90Q03938 601 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 ANKRD34AQ69YU3 496 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 FAM19A1Q7Z5A9 133 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 NR2C2APQ86WQ0 139 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 PRIMA1Q86XR5 153 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 Q8N976 141 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 AJUBAQ96IF1 538 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 KCNS1Q96KK3 526 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 BMFQ96LC9 184 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 LINC00477Q96M19 166 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 C9orf85Q96MD7 179 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 LINC01587Q99440 93 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 IMUPQ9GZP8 106 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 FBXL15Q9H469 300 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 VSIRQ9H7M9 311 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 ISG20L2Q9H9L3 353 aaKnown RBP4.3□□□□□ -1.72
UBE4A-203ENST00000545354 DOCK2Q92608 1830 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 ITGB4P16144 1822 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 SMIM28A0A1B0GU29 152 aa4.3□□□□□ -1.72
UBE4A-203ENST00000545354 SYS1-DBNDD2H3BUS1 97 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms