RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 H7C1H1 209 aa17.2■□□□□ 0.34
BPTF-208ENST00000544778 RRHO14718 337 aa17.2■□□□□ 0.34
BPTF-208ENST00000544778 FAM27BQ5VT28 67 aa17.2■□□□□ 0.34
BPTF-208ENST00000544778 HLA-DQA1P01909 254 aa17.2■□□□□ 0.34
BPTF-208ENST00000544778 OR4X2Q8NGF9 303 aa17.2■□□□□ 0.34
BPTF-208ENST00000544778 KCNK7Q9Y2U2 307 aa17.2■□□□□ 0.34
BPTF-208ENST00000544778 PGLYRP1O75594 196 aaPredicted RBP17.19■□□□□ 0.34
BPTF-208ENST00000544778 STHQ8IWL8 128 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 MBD3L1Q8WWY6 194 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 WNT2BQ93097 391 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 NRIP2Q9BQI9 281 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 SSBP3Q9BWW4 388 aaPredicted RBP17.19■□□□□ 0.34
BPTF-208ENST00000544778 NXT2Q9NPJ8 142 aaKnown RBP17.19■□□□□ 0.34
BPTF-208ENST00000544778 TMEM74BQ9NUR3 256 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 PEBP1P30086 187 aaKnown RBP17.19■□□□□ 0.34
BPTF-208ENST00000544778 H3BRM9 83 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 MT-ND6P03923 174 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 ZNF688P0C7X2 276 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 LIMS2Q7Z4I7 341 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 MUC21A0A0G2JKD1 596 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 MUC21A0A140T8X8 626 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 MUC21Q5SSG8 566 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 SLC25A34Q6PIV7 304 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 V9GYH0 126 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 TRAV12-3A0A0B4J271 114 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 C8orf88P0DMB2 117 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 C10orf111Q8N326 155 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 MOSPD3O75425 235 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 WDR82Q6UXN9 313 aa17.19■□□□□ 0.34
BPTF-208ENST00000544778 STPG2Q8N412 459 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 KLF14Q8TD94 323 aaPredicted RBP17.18■□□□□ 0.34
BPTF-208ENST00000544778 REPIN1Q9BWE0 567 aaKnown RBP17.18■□□□□ 0.34
BPTF-208ENST00000544778 ZG16O60844 167 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 RNASEH2CQ8TDP1 164 aaKnown RBP17.18■□□□□ 0.34
BPTF-208ENST00000544778 USP54Q70EL1 1684 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 CFDP00746 253 aaPredicted RBP17.18■□□□□ 0.34
BPTF-208ENST00000544778 ASAH2BP0C7U1 165 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 ASIPP42127 132 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 TAF15Q92804 592 aaKnown RBP eCLIP17.18■□□□□ 0.34
BPTF-208ENST00000544778 SEMA5BQ9P283 1151 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 NDUFA3O95167 84 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 IGKV1D-16P01601 117 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 C9orf62Q8N4C0 152 aa17.18■□□□□ 0.34
BPTF-208ENST00000544778 MEF2CQ06413 473 aaPredicted RBP17.17■□□□□ 0.34
BPTF-208ENST00000544778 DDA1Q9BW61 102 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 CDK2AP2O75956 126 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 ZNF385CQ66K41 422 aaPredicted RBP17.17■□□□□ 0.34
BPTF-208ENST00000544778 TMEM52Q8NDY8 209 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 RREB1Q92766 1687 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 TGIF2-C20orf24A0A0A6YYL0 155 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 MUC1P15941 1255 aaPredicted RBP17.17■□□□□ 0.34
BPTF-208ENST00000544778 CLDND2Q8NHS1 167 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 TRAV21A0A0B4J279 112 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 OR9G1Q8NH87 305 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 FAM168AQ92567 244 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 SYNGR3O43761 229 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 OR1P1Q8NH06 330 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 ERGP11308 486 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 ICAM4Q14773 271 aa17.17■□□□□ 0.34
BPTF-208ENST00000544778 A0A1W2PPV9 198 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 STAG3L3P0CL85 134 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 CDCP2Q5VXM1 449 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 SELENOHQ8IZQ5 122 aaKnown RBP17.16■□□□□ 0.34
BPTF-208ENST00000544778 RARRES2Q99969 163 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 UQCR10Q9UDW1 63 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 MARCH11A6NNE9 402 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 NSUN5P1Q3KNT7 163 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 WFIKKN1Q96NZ8 548 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 ZNF646O15015 1829 aaPredicted RBP17.16■□□□□ 0.34
BPTF-208ENST00000544778 ZNF501Q96CX3 271 aaPredicted RBP17.16■□□□□ 0.34
BPTF-208ENST00000544778 RSPO4Q2I0M5 234 aaPredicted RBP17.16■□□□□ 0.34
BPTF-208ENST00000544778 NPIPB3Q92617 1050 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
BPTF-208ENST00000544778 IGKV1D-33P01593 117 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 IGKV1-33P01594 117 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 TMEM222Q9H0R3 208 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 DLL3Q9NYJ7 618 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
BPTF-208ENST00000544778 MEF2BQ02080 365 aaPredicted RBP17.15■□□□□ 0.34
BPTF-208ENST00000544778 SCGB3A1Q96QR1 104 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 SPSB4Q96A44 273 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 TMEM106BQ9NUM4 274 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 C7orf66A4D0T2 115 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 GPR146Q96CH1 333 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 FOXA2Q9Y261 457 aaPredicted RBP17.15■□□□□ 0.34
BPTF-208ENST00000544778 CRPP02741 224 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 HSPE1P61604 102 aaKnown RBP17.15■□□□□ 0.34
BPTF-208ENST00000544778 ZP4Q12836 540 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 CLEC19AQ6UXS0 136 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 GLMPQ8WWB7 406 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 TMEM250H0YL14 139 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 MIXL1Q9H2W2 232 aa17.15■□□□□ 0.34
BPTF-208ENST00000544778 TRAV24A0A0B4J272 114 aa17.14■□□□□ 0.34
BPTF-208ENST00000544778 FOXS1O43638 330 aa17.14■□□□□ 0.34
BPTF-208ENST00000544778 TNFRSF9Q07011 255 aa17.14■□□□□ 0.34
BPTF-208ENST00000544778 TMEM186Q96B77 213 aa17.14■□□□□ 0.34
BPTF-208ENST00000544778 SCARF2Q96GP6 870 aaPredicted RBP17.14■□□□□ 0.34
BPTF-208ENST00000544778 A0A1W2PP11 408 aa17.14■□□□□ 0.33
BPTF-208ENST00000544778 SFXN3Q9BWM7 321 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms